Aliarcobacter skirrowii: EI285_08705
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Entry
EI285_08705 CDS
T05743
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ask
Aliarcobacter skirrowii
Brite
KEGG Orthology (KO) [BR:
ask00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ask03016
]
EI285_08705 (truD)
Enzymes [BR:
ask01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EI285_08705 (truD)
Transfer RNA biogenesis [BR:
ask03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EI285_08705 (truD)
Prokaryotic type
EI285_08705 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AZL54646
LinkDB
All DBs
Position
1663717..1664715
Genome browser
AA seq
332 aa
AA seq
DB search
MIKREYFLHDKKLNFNFFQNIEDFIVEEEPIEFSGFGNFLILKIVKQNCDTWELIDKVAK
HLRVFSNEIGYAGLKDKNATTTQYISIPKKYQKDIKNYKSKKIEIFEIGLHNKKLNIGDL
KGNRFKINLKDVELEELYTIDKVLKDISKFGMPNYFGFQRFGKEVEENLEKAKQLLFDDY
KVKDKKVAKMLISAYQSTYFNAWLVERLKLNKSEFKLLNGDIFYDIESSKLFTPKAINEK
IINDFKDKKITPTGLLPGNDVFKARDEALKIEQKYDNSDIREKGYRREAIVFPEILSTKY
NKEKKEALLDFILPKGSYATVLIEALANRNFG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaaagagagtattttttacacgataaaaaattaaatttcaatttttttcaaaat
attgaagactttatagttgaagaagagcctatagagttttcaggttttgggaacttttta
atactaaaaatagtaaagcaaaattgcgatacttgggaacttatagataaagttgcaaaa
catcttagagtattttcaaatgagattggttatgctggattaaaagataaaaatgcaaca
acaactcaatatatttcaatacctaaaaaatatcaaaaagatatcaaaaattataaatct
aagaaaatagagatttttgaaataggtttacacaataaaaaactaaatattggtgattta
aaagggaatcgatttaagataaatctaaaagatgttgaacttgaagagctttatactata
gataaagttttaaaagatattagcaagtttggtatgccaaactattttggatttcaaaga
tttggaaaagaggttgaagagaatttagaaaaagcaaaacaactactttttgatgattat
aaagtaaaagataaaaaagtagctaagatgcttataagtgcttaccaaagcacatatttt
aatgcttggttggttgaaagattaaaactaaacaaaagtgaatttaaacttttaaatggt
gatatattttatgacatagaaagctctaaactttttacaccaaaagctataaatgaaaag
attataaatgattttaaagataaaaaaataactccaacaggacttctacctggaaatgat
gtttttaaagcaagagatgaagctttaaaaatagagcaaaaatatgataatagtgatatt
agagaaaaaggttacagaagagaagctattgtatttccagaaattttatctacaaaatat
aataaagagaaaaaagaggctcttttagattttatacttcctaaaggctcttatgctaca
gttttaattgaagctttagccaatagaaattttggctaa
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