Aequorivita sublithincola: Aeqsu_0531
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Entry
Aeqsu_0531 CDS
T02132
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aeqsu_0531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asl03019
]
Aeqsu_0531
03016 Transfer RNA biogenesis [BR:
asl03016
]
Aeqsu_0531
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Aeqsu_0531
Messenger RNA biogenesis [BR:
asl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Aeqsu_0531
Transfer RNA biogenesis [BR:
asl03016
]
Prokaryotic type
tRNA degradation factors
Aeqsu_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AFL80043
UniProt:
I3YSS5
LinkDB
All DBs
Position
528881..531124
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AA seq
747 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYEQKDLDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFVINPSRAQLEESDIDMMI
GASADSVMMVEGEMKEISEEEMTEAIKFAHEHIKVQCAAQIRLAEAFGKKETREYPAERE
DADLEKKVYDMAYDKVYAIAQAGSAKHERSAAFSEIKDAIKATFSEEELEDFGDLVSKYY
RKAEKATIRDLTLNEGLRLDGRKTVDIRPIWCEVDYLPSVHGSAIFTRGETQALATVTLG
TSREANKIDMPSYEGEETFYLHYNFPPFCTGEARPIRGTSRREVGHGNLAQRALKGMVPA
DCPYTVRVVSEVLESNGSSSMATVCAGTMAMMDAGIQMKKPVSGIAMGLISDGDSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLGYEILVAALNQARDGRLHILDKL
TEAIAAPREDVKPYAPKMVTVRIPNEYIGALIGPGGKVIQELQKVTGCTIVINEDPVTEE
GIVEILGTGQEGIDAVLAKIDSLTFKPEVGSVYEVKVIKMLDFGAVVEYMDAPGNETLLH
VSELAWERTENVTDVVNMGDVFDVKFIGFDPRTKKDKVSRKALLPKPEGYKERPPRDDSR
SGGRDNRGRDNRGRDDRNSRDRDRKRD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaaagtatttagagaggtcatagacctaggtgatggaagagaaatttccatc
gaaaccggaaaattggcaaaacaggcccatggttctgttgttgtacaatccggaaaatgt
atgttgctttgtaccgtagtttccaactacgagcaaaaagacttagattttctaccatta
acagtagactatcgcgaaaaattcgcagcttcaggtcgttatcctggtggtttcttcaaa
agagaagcaagaccgagcgacggtgaagtattgacaatgcgtttggtggatcgtgtattg
cgtccccttttcccaaaagattatcactcagaaacacaagttatgattcaattaatgagt
catgatgaagatgtaatgccagatgctatggcaggtttagccgcttctgcagctattcaa
ctttcagattttccttttgaatgtgctatttctgaagcaagagtaggacgtgtaaatggc
gaattcgtaatcaacccttcaagagcacagctagaagaatctgacatcgatatgatgatt
ggtgcttctgcagacagcgtaatgatggtagaaggcgaaatgaaggaaatttctgaagaa
gaaatgaccgaagcaattaaatttgcacacgaacatattaaagtacaatgtgctgcgcag
attagattggccgaagcttttggaaaaaaagaaactcgtgagtatccagcagaaagagaa
gatgcagaccttgagaaaaaggtatacgatatggcttatgataaagtatatgctattgca
caagctggttcagctaagcacgaaagaagtgctgctttttctgaaataaaagatgctatt
aaagctactttttctgaagaagaattagaagactttggcgatctagtttcaaaatactac
cgtaaagcagaaaaagctacaattcgtgatttaacattaaacgaaggtctacgtttagat
ggccgtaaaacagttgacattcgcccaatttggtgtgaagttgattatttaccatctgtt
cacggttcagcaattttcactcgtggagaaacgcaagccttggcaaccgtaactttggga
acttcaagagaagcaaacaaaattgatatgccatcttacgaaggagaagaaactttctac
cttcactataacttcccacctttctgtacaggagaagctagaccaattcgtggaacatct
cgtcgtgaggtaggtcacggtaacttggcacaacgtgcacttaaaggaatggtaccagca
gattgcccgtacacggtacgtgtagtttctgaagtattagaatctaacggttcatcatct
atggcaactgtttgtgcaggtacaatggcaatgatggatgccggtatccaaatgaaaaaa
ccagtttctggtatcgcaatgggattaatttctgatggtgatagtggaaaatatgcagta
ctatctgatattttgggtgatgaagatcacttaggagatatggactttaaagtaaccgga
acggcagatggtattacagcttgccagatggatattaaagtgaaaggattgggttatgag
attcttgtagctgcattaaaccaagcgagagatggtcgtttacacattcttgataaattg
accgaagctattgctgcacctcgtgaagatgtgaaaccttatgcacctaaaatggtgact
gttcgtattcctaatgaatacattggcgcattaattggaccaggtggaaaagttattcaa
gaacttcaaaaagtaacaggatgtactatcgtgattaacgaagaccctgtaactgaagaa
ggtattgttgaaattttaggtactggacaagaaggaattgatgctgttttagcaaaaatt
gattccttaacctttaagccagaagttggaagcgtttacgaagtgaaagtaatcaagatg
cttgactttggtgctgttgttgaatatatggatgctccaggaaacgagactttgctacac
gttagcgaacttgcttgggaacgcacagaaaacgtaaccgatgttgtaaatatgggtgat
gtttttgatgtaaaattcataggtttcgacccaagaacgaagaaagataaagtttctaga
aaagcgttattgccaaaaccagaaggttacaaagaacgcccaccacgtgacgatagccga
agcggtggacgtgataatcgtggacgcgacaaccgtggccgtgatgatcgcaatagtcgt
gatagagatagaaagagagattaa
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