Aequorivita sublithincola: Aeqsu_0751
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Entry
Aeqsu_0751 CDS
T02132
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03030
DNA replication
asl03430
Mismatch repair
asl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aeqsu_0751
03430 Mismatch repair
Aeqsu_0751
03440 Homologous recombination
Aeqsu_0751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_0751
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_0751
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aeqsu_0751
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aeqsu_0751
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aeqsu_0751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
KH_DUF2096_C
DEDDh_C
LPG_synthase_C
Motif
Other DBs
NCBI-ProteinID:
AFL80258
UniProt:
I3YTE0
LinkDB
All DBs
Position
758956..760434
Genome browser
AA seq
492 aa
AA seq
DB search
MKSQLFAIIDVETTGGGIAGNRITEICIALLRDGEVIDKYSTLVNPERDIPYYITALTGI
DNEMIAKAPFFFEVAEKIEEFTKDAIFVAHNVGFDYNVIRGEFQLLGQTYNRKKLCTVRL
SRKLIPGMLSYSLGRLCSTLNIPHLNRHRAEGDVDATVILFQRLLSLDVSFTIMNSFMNS
RSKQATLPPHLSAEQITELPEASGIYLFKNQKHKVIYAGKAKNIKKRVLSHFYDKKNKEY
HLGQETHFIDYEITGNELLALLVESEHIRKHYPKFNRAQKWPATTHQIISYINQRGIIQL
ALGKTKVLQDSVGTFYNKTEAIEKLEEICETFKLCPRFCSLQSNSEKCSHYRIKNCEGIC
EETETVEDYNLKVQAAMRALKENNQSFAIQGKGRTEGEIAFALVVEGQYKGFGFFDRSDA
ICNIEDYEPFLKLQQASYHTHAIIRSHLKKNGERNVVYFEEAPTLSNHRIKTLKKSAVKA
NLEDVFSHWDLG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacaacttttcgctattatagatgtagaaaccactggcggtggtattgcaggc
aatcgcattactgaaatttgcatagcacttttaagagatggtgaagtaattgataaatat
tctacgcttgtaaacccggagcgcgacattccgtattacattacagcgcttactgggatt
gacaatgaaatgattgccaaagctcccttttttttcgaggtcgcagaaaagattgaagaa
tttacaaaagacgcaatttttgtagcgcacaatgtaggttttgattacaatgtaattcgt
ggagagtttcagcttttgggtcagacctacaatcgcaaaaaactttgtacagttcgactt
tcccgaaaattgattccaggcatgctttcttatagtttaggaagactttgcagcacccta
aatataccacaccttaacaggcaccgtgcggagggagatgtagatgcaactgtcattctt
tttcaaagattactttccttagacgtgagttttaccataatgaattcatttatgaactca
cgttccaagcaagccactctaccgcctcatttgtctgcggaacaaataacggagttgcca
gaagccagtggaatatatcttttcaaaaatcaaaaacataaggttatttatgcgggcaag
gcaaaaaatataaaaaaacgcgtactctctcatttctacgataaaaaaaacaaggaatat
catttaggtcaggaaacccattttatagattatgaaattacaggcaatgaattactggcg
ctattggtggaatctgaacatattcgaaaacattatcccaaattcaaccgagctcaaaaa
tggccagcaacaacgcatcaaattataagttatataaatcagcgtggtattattcaactt
gctttaggcaaaacgaaagtattacaagattctgtgggcactttttacaataaaacggaa
gccattgaaaagctagaggaaatatgtgaaacttttaagctctgtccccgtttttgcagc
ttgcagagcaattctgaaaaatgctctcactacagaataaaaaactgtgagggaatttgt
gaagaaaccgaaactgtggaagactataatctgaaagttcaagctgcaatgcgagcctta
aaagaaaataaccaaagctttgccatacagggaaaaggtagaacagaaggcgaaatagcg
tttgcactagtggttgaaggacaatacaaaggttttggtttttttgatagaagtgatgct
atttgtaatattgaagactacgaaccttttttgaaactgcagcaagccagttaccatacg
cacgccattattcggagtcatcttaaaaagaatggcgagcgaaatgtggtttattttgaa
gaagcacctaccctttcaaaccacagaattaagactttgaaaaagagcgctgtgaaagct
aatttagaggatgtttttagtcattgggatttgggataa
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