Aequorivita sublithincola: Aeqsu_0965
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Entry
Aeqsu_0965 CDS
T02132
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03030
DNA replication
asl03410
Base excision repair
asl03420
Nucleotide excision repair
asl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aeqsu_0965
03410 Base excision repair
Aeqsu_0965
03420 Nucleotide excision repair
Aeqsu_0965
03440 Homologous recombination
Aeqsu_0965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_0965
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_0965
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aeqsu_0965
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Aeqsu_0965
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Aeqsu_0965
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aeqsu_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH
Imm51
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFL80466
UniProt:
I3YTZ8
LinkDB
All DBs
Position
1012079..1014937
Genome browser
AA seq
952 aa
AA seq
DB search
MSEKKRLFLVDAYALIFRGYFALIKNPQINSKGQNTSAIMGFMNSLIDVVKRERPDHLAV
CFDKGGSEARNEMFPDYKANRDETPDAIRFAIPHIYNILEAMKIPIMVKEGFEADDVIGT
LAKKAEKEGYTTFMVTPDKDFAQLVSENIFMYRPVFGGGYETWGIPEVQKKFEVKDPIQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFLAEFGSMEGLLANTAQLKGKMKEKVEDNAELG
LLSKKLATIMLDVPVDFNEADFEMCPPDTHKVLEIFDDLEFRRLKDNFLNAFSIEGMSSV
GTSRVTQENNISAETKSKPAKNNPAGEGQFSLFGNDGDTAETIKNFSSRATIENTEHFYQ
TVQPGMGTKLFLQNLMKQKSVCFDTETTGLNPLEAELVGIAFSWEKGKGFYIPFPENREE
AQQLLEEIRPFFEDENIQKIGQNLKYDIKVLAKYNISVKGKLFDTMLAHYLINPDMRHNM
DVLSETYLNYTPVSITELIGKKGKNQLNMRDVDVEKQTEYAVEDADVTFQLKEHFEKELG
EANTQKLFDEIEVPLLRVLAAMELEGVNLDEDFLKGLSVDLDKDILQLEKHIYEEAGETF
NIASPKQLGEILFEKLKLVDKPKKTKTGQYSTAEDVLSYLAKDHKIIRDVLEYRGLAKLK
STYVDALPDQVEKSTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPKN
EDYVLMAADYSQIELRIIAALSEEDNMIEAFKNNEDIHASTAAKVFNVPLSEVTREQRSN
AKTVNFGIIYGVSAFGLSNQTDLSRTEAKDLIETYYKTYPKLRNYMSEQIDFARENGYVQ
TVLGRRRYLKDINGSNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLEEENYKSKM
LLQVHDELVFDTYKPELEKLKAMVKHEMENAYKLSVPLDVELGVGENWLEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaaaacgtctctttcttgttgatgcctacgccctcattttcagaggatat
tttgcacttataaaaaaccctcaaataaacagtaaaggtcagaatacctcagccattatg
gggtttatgaactccctaatagacgtagtgaaaagagaacgcccagaccatttggccgta
tgttttgacaaaggtggaagcgaagcccgcaacgaaatgtttccagactacaaagctaat
agagacgaaaccccagacgctatccggtttgccattccacatatttataacattcttgaa
gccatgaaaattccaattatggtgaaggagggttttgaagcagatgacgtgattggaacc
ttagcaaaaaaagctgaaaaagaaggctacacaacctttatggttacgccagacaaggat
tttgcacaattggtttccgaaaatatatttatgtatcgccctgtttttggcggcggttat
gaaacttggggcattccagaagttcagaaaaaatttgaagttaaagacccaattcaagta
atagattttttaggaatgatgggcgatagcagtgataacattcccggacttccaggcgta
ggtgaaaaaactgcaaagaaatttttggcagaatttggctctatggaaggcttgcttgct
aataccgctcagttaaaaggtaaaatgaaggagaaagttgaagacaatgctgaacttggt
ttactcagcaaaaaactagcaactattatgctagatgtgcccgttgatttcaatgaagcc
gattttgaaatgtgcccaccagacacacataaagtcttggaaatttttgatgatttagaa
ttcagaagactaaaagataattttctcaacgccttttctattgaaggaatgtcatctgtt
ggcactagccgtgtaactcaagaaaataatattagtgcagaaacaaaatcgaaacccgcc
aaaaacaatcctgctggtgaaggtcaattttcactatttggcaacgatggcgatactgct
gaaaccataaaaaactttagttctcgagcaactattgaaaacaccgaacatttctatcaa
accgttcaacctggaatgggaaccaaactgtttcttcagaatttaatgaagcagaaaagt
gtctgttttgatacagaaacaacaggtttaaatccgttagaggcagaattagttggaatt
gctttttcttgggaaaagggcaaaggtttttacataccattcccagaaaatcgtgaagaa
gcacaacaacttttagaagaaatccgtccgttttttgaagatgaaaacattcaaaaaatc
ggtcagaatttaaaatacgacattaaagtccttgccaaatacaatatttcagtaaaagga
aaattgtttgataccatgctcgcgcactatcttataaacccagatatgcgtcacaatatg
gacgttttgagcgaaacctatctgaactacacgcccgtttccatcacagaattgattggt
aaaaaaggtaaaaatcaactaaacatgcgcgatgttgatgttgagaaacaaaccgaatac
gccgttgaagatgcagacgtaacttttcagctaaaagaacatttcgaaaaagaattgggc
gaagcaaatacccaaaaactttttgatgaaattgaagtaccgctcttacgagttttagcg
gctatggaattggaaggagttaatctagatgaagatttccttaaaggtctttctgtagat
ttggataaagacattcttcaactagaaaaacatatttacgaagaagctggcgaaaccttc
aacattgcttcaccaaagcaattaggtgaaattctctttgaaaaattgaaattagttgac
aagccgaagaagaccaaaacaggtcaatattccactgctgaagatgtgctttcctatttg
gcaaaagaccacaaaataatccgtgatgttttggagtatcgtggtttagcaaaattgaaa
agtacttatgtagatgctttgccagaccaagttgaaaaatccactggtcgcgttcataca
gactatatgcaaaccgtggccgcaactggtcgcttgagcagcaacaatccaaaccttcaa
aatattccaattagaaccgagcgcggacgtgaagttcgaaaagcattcatcccaaaaaac
gaagattacgttttgatggctgcggattattcacaaatagaactccgcattattgcagct
ttaagcgaagaagacaatatgattgaagccttcaaaaataatgaggacattcacgcttca
acagctgcaaaggttttcaatgttcctttaagtgaagtaacccgtgaacaaagaagcaac
gcaaaaacagtaaattttggaataatctacggtgtttcagctttcggtttaagcaaccaa
actgatctttccagaactgaagcaaaagatttgattgaaacctattacaaaacctaccca
aaacttcgcaattacatgagcgagcaaatagattttgctcgtgaaaacgggtacgtacaa
acggttttaggaagaagaagatacttaaaagacataaacggaagcaaccaagtagttcgt
ggtgcagcagaacgcaacgcagtaaatgctccaatacaaggtagcgcggcagacattatt
aaaattgcaatgataaacattcacaaaaagttagaggaagaaaactacaaaagcaaaatg
ctccttcaagtgcatgatgaacttgttttcgacacttataaacccgaactggaaaaacta
aaagctatggtgaaacacgaaatggagaatgcttacaagctttctgttccgttggatgta
gaattgggtgttggggagaattggttggaagcgcattaa
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