Aequorivita sublithincola: Aeqsu_1270
Help
Entry
Aeqsu_1270 CDS
T02132
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asl
Aequorivita sublithincola
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_1270
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_1270
Enzymes [BR:
asl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Aeqsu_1270
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Topoisomerases
Aeqsu_1270
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Aeqsu_1270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Sen15
Motif
Other DBs
NCBI-ProteinID:
AFL80764
UniProt:
I3YUU6
LinkDB
All DBs
Position
complement(1355704..1356693)
Genome browser
AA seq
329 aa
AA seq
DB search
MYYRKKHGKGFTHKDSTGKTVKDKATRNWIKSLVIPPAWTDVEISENRKADLLVTGRDDK
DRKQYIYSAKHTEKQNSKKFDRIIDFADQLEHMRRVTGQHLRKRKLNREKVLATMLRLLE
TAFFRPGSETYSKENATYGLTTLRHKHLTIEGDEIIFTYNGKSGQDQEKHIVDKKLAKIV
QEIDDMPGYEIFKYLDEDDNIVDVKSDDLNAYIHEVMGEDFSAKDFRTWAGTMIAAIALD
ELGVVDKKDQKLLDKNIKEAVNRVSERLGNTPSVARGSYIDPRVIDDYTQGRTLHYFEKE
INMLLKKAENLSKEEIGVLCMLRNRLKSK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtattatagaaagaaacacgggaaaggttttactcataaagacagtactggaaagacg
gtaaaagataaagcaacacgtaactggataaaatcactcgttattcctccagcctggaca
gatgtagaaattagcgaaaacagaaaagcagatttactggtgacaggtcgagacgataaa
gaccgaaaacaatacatctacagtgcaaaacacacggaaaaacaaaattctaaaaaattt
gaccgaattattgattttgcggatcaattagaacatatgcgtcgcgttacaggacagcat
cttcgcaaacgaaaattaaatcgcgaaaaagtattggcaactatgcttcgactgttggaa
actgcattttttagacccggaagtgaaacatattccaaagaaaatgccacttatggttta
accactttacgccacaaacatcttaccattgaaggagatgaaattatcttcacctacaac
ggaaaatccggacaagatcaggaaaaacatatagtcgataaaaaattggccaaaattgtt
caagaaattgatgatatgccaggctatgaaatttttaaatatcttgatgaagatgacaat
atagttgatgtaaaaagcgacgatctaaacgcctacattcacgaagtaatgggtgaagat
ttttcagccaaggattttagaacttgggccggaactatgattgcagcaattgctttggac
gaacttggcgttgtagacaaaaaagatcaaaaactactagacaaaaatataaaagaagct
gtaaatagggtttcagaaagattgggaaatacaccttccgttgccagaggttcttatatt
gatccccgagtaatagatgattatacacaaggacgaacattacattatttcgaaaaggaa
ataaacatgttgcttaaaaaagccgaaaacctttccaaagaagaaattggggttttgtgt
atgcttcgcaatcgtttaaaaagcaagtaa
DBGET
integrated database retrieval system
