Aequorivita sublithincola: Aeqsu_1355
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Entry
Aeqsu_1355 CDS
T02132
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
asl
Aequorivita sublithincola
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asl03019
]
Aeqsu_1355
03009 Ribosome biogenesis [BR:
asl03009
]
Aeqsu_1355
Messenger RNA biogenesis [BR:
asl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Aeqsu_1355
Ribosome biogenesis [BR:
asl03009
]
Prokaryotic type
rRNA processing factors
Aeqsu_1355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
S1
Motif
Other DBs
NCBI-ProteinID:
AFL80848
UniProt:
I3YV30
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All DBs
Position
1447061..1448620
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AA seq
519 aa
AA seq
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MNNELFIRSGSQEVDFALLKDGRLIELHKEEEGNNFTVGDIFLAKIRKTVPGLNAAFVNV
GYEKDGFLHYHDLGPKVLSQLKFVKSATSGKLKDFSLTNFPFEKEIDKHGNLNDALKSNQ
SILVQIVKEPISTKGPRISSELSIAGRYIVLVPFSDRVSVSQKIESTEEKDRLKRLITSI
KPKGFGVIIRTVAEGKKVAELDKDLQNLTERWTAMCKKLQGAHHPSKVLSELNRGASIIR
DMFNDSFSAIHIDDETLYLQIKDYVQEIAPKKDNIVKFYDSNVPMFEKFGIERQIKTSFG
KTVSGSKGAYLVIEHTEAMHVIDVNSGNRSNKQKTQEGTALEVNLIAATEVARQLRLRDM
GGIIVVDFIDLANATHRKQLYNHLRDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TREEDPNANGSGGDENGEIEAPIIVINRINEEVKRLFKKDYKKITLDTHPFIAAFLTKGF
PSVRTKWFLEHKKWVKIQPRDAYTYLEYHFHDKDGELIK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacgaattatttattagatccggttcacaagaagttgattttgcccttttaaag
gatggaagacttatagagcttcacaaagaagaagaaggtaacaattttacggttggcgat
atatttctcgctaaaatccgtaaaacagttcctgggcttaacgccgcctttgtgaatgta
ggttacgagaaagatggttttttacactatcacgatcttggaccaaaagtgctttcgcaa
ttaaaatttgtgaaaagtgccacttcaggtaagttaaaggatttttccttaactaatttt
ccattcgaaaaagagattgataagcacggcaacttaaatgatgccttaaaaagcaatcaa
tccatcttggttcaaattgtaaaagaacccatttccactaaaggaccacgtattagttcc
gagctttctatagctggaagatatattgttttggttccgttttccgatagagtttctgtt
tcacaaaaaatagaaagtaccgaagaaaaagacaggttaaaacgcttgataacaagcatt
aaaccaaaaggatttggcgtaattatacgcaccgtggctgagggcaaaaaagtagcagaa
ctggacaaagatttacagaaccttaccgaacgctggacggcgatgtgtaagaagctacaa
ggggcgcaccacccttcaaaagtgctgagcgagctaaacaggggagcttctattatccgc
gatatgtttaacgattcattctccgcaatacatattgacgacgaaaccctatacttgcaa
ataaaagattatgtgcaggaaattgcaccaaaaaaagacaatatcgtaaagttttatgac
tccaatgttccgatgtttgaaaaattcggaattgaaaggcagatcaagacttccttcgga
aaaacagtatcaggtagcaaaggagcttatttggtaattgaacacaccgaagcaatgcac
gtaatagacgtgaacagcggtaaccgaagcaacaagcaaaaaacacaagaaggcacagcg
ctagaagtgaatttaattgcagccaccgaggtggcaagacagctaaggttgcgcgatatg
ggaggaattattgtggtggattttattgatttggcaaacgccactcaccgcaaacagctc
tacaatcatcttcgtgatgaaatgaaggatgacagagcaaaacacaaaattctgccccca
agtaaatttggattgatacaaataaccagacagcgagttcgtccagagatgaacattaaa
acgcgagaggaagatccaaatgcaaacggaagcggcggcgatgaaaatggtgaaatagaa
gcaccaatcattgttatcaatagaataaatgaagaggtgaaacgccttttcaaaaaagac
tataaaaagataacgttagatacgcatccttttatagcggcctttttaaccaaaggtttc
ccaagtgttaggaccaaatggtttttggaacacaaaaaatgggtaaaaattcaacctcga
gatgcttacacgtatcttgaatatcattttcacgataaagatggtgaattgattaaataa
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