Aequorivita sublithincola: Aeqsu_1413
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Entry
Aeqsu_1413 CDS
T02132
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asl
Aequorivita sublithincola
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asl03016
]
Aeqsu_1413
Enzymes [BR:
asl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Aeqsu_1413
Transfer RNA biogenesis [BR:
asl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Aeqsu_1413
Prokaryotic type
Aeqsu_1413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
AFL80906
UniProt:
I3YV88
LinkDB
All DBs
Position
complement(1510057..1510761)
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AA seq
234 aa
AA seq
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MNNKNLQAEDYKEGQVLLIDKPLEWTSFQAVNKLRWLIRKSFDIKKIKVGHAGTLDPLAT
GLLIICTGKFTKRIDTFQAQEKEYTGSFTLGATTPSYDLETQIDQTFDVSEITSEKIHEA
TKQFLGEIQQQPPVFSALKKEGKRLYEYARSGEEVEIPFRTVTISEFEITKIELPNIDFR
VVCSKGTYIRSLANDFGKALDNGAHLSALRRTRIGEFSVENAVGIEAFEASLPS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaaaaccttcaagccgaggattataaagaaggtcaagtactattgatagac
aaacctttggaatggacttcctttcaagcggtgaataaattacgttggttaattcggaaa
tccttcgacataaaaaaaataaaagttggtcacgctgggaccttagatcctttggcaacg
ggacttttaattatctgcacaggaaaattcacaaaaagaatagacacttttcaagcgcag
gaaaaagaatatactgggagttttactttgggagcaacaacgccaagttatgatcttgaa
acccaaattgatcaaaccttcgatgtttcagaaatcacttctgaaaaaatacacgaagct
acaaagcaatttttaggcgaaatacaacaacaaccacccgttttttcggcattgaaaaaa
gaaggaaaacgactttatgaatatgcgaggagcggtgaagaagttgaaattcctttcaga
accgtaaccatttcagaatttgaaataacaaagatcgagcttccaaatatagatttcaga
gtggtttgtagtaaaggaacttatatacgttcattagcgaatgattttggaaaagcgttg
gacaatggtgcccatctttcggctttacgaagaacgcgaattggagaattctcagtagaa
aatgctgtcggtattgaggcctttgaagcctcgttaccaagttaa
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