Aequorivita sublithincola: Aeqsu_1601
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Entry
Aeqsu_1601 CDS
T02132
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03030
DNA replication
asl03430
Mismatch repair
asl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aeqsu_1601
03430 Mismatch repair
Aeqsu_1601
03440 Homologous recombination
Aeqsu_1601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_1601
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_1601
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aeqsu_1601
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aeqsu_1601
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aeqsu_1601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AFL81086
UniProt:
I3YVR8
LinkDB
All DBs
Position
1703042..1707472
Genome browser
AA seq
1476 aa
AA seq
DB search
MFLIFDTETTGLPKRYNAPVSDSDNWPRCIQIAWQLHDEMGDMIEHQDYLVQPEGFNIPF
DAEKIHGISTELATSEGISLEEMIEKFKIALSKTKFIVGQNLGFDVNIMGAEFFRLGIEN
PLPNFPVLDTCTETTAQLCQIPGGRGGKSKLPTLTELHEYLFSEPFAEAHNATADVEATT
RCFLELVRRQIFTKEELDVQPDYFENFSEENPKIIQLIGLKHINLKKASEKIRKQMQAVS
EKEEISSEEIKENIATLEDAPFVHLHNHSQFSILQSTSSTIDLVNAAVENNMSAVAITDT
GNMMGAFHFVQAVSNYNKTLADLPKNDEEETSPEPLKAIVGCEFFVCEDHLNKNHKDNGY
QIVMLAKNKSGYHNLAKMASIAYTEGFYYVPRIDKNIVEKYKEDIIVLTGSLYGEVPGKI
LNIGENQAEEALLWWKEMFGEDLYVEIMRHDQEDEKRVNDVLVEMAQRNNVKLVACNNTY
YIDKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSQDQMKVLFKDLPEAI
SNIEEVVSKIQPFSLHRDVLLPNFGIPKKFLKTDDIDGGKRGENAYLRYLTYEGAKRRYP
ELIEVSYEALTSFELPENASERVKEIKQRLDFELDVIANTGYPGYFLIVQDFIAEARKMD
VSVGPGRGSAAGSAVAYCLGITNICPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSKVM
DYVINKYGSNQVAQIITYGTMAAKSSIRDTARVLDLPLNDADRISKLIPNMTKLNKIFGL
SDAELRGRFRSDELPKVHELLNLSKGSDLEAQTINQAKVLEGSVRNTGIHACGVIITPSD
ITDFVPVATAKDSDLYVTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKHKHDIDLD
PDVFPLDDEKTYELFQRGETVGIFQYESAGMQKYMKELKPTVFADLIAMNALYRPGPMEY
IPSFVKRKHGEEEIEYDLPGMEEYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAM
GKKQKSVLDKMKPQFVAQASEKGHDAEKLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTA
YLKAHYPAEYMAAVLSNNMSDIKQVTFFMDECKRMGMKVLGPDVNESFHKFTVNDQGAIR
FGMGAVKGVGSSAVSTIVEHRKDGKYKSVFDLAKRIDLRSANKKAFENLALAGGFDSFDA
HRAQYLHDDGDGVMFLEKVLRYAAKYQETQNSSQVSLFGDASEVQIPEPEVPPCEEWGTM
KKLRQEREVVGVYISGHPLDDFKIEMDSFTNCKVSNFNHLEDYLNKEMCFGGVVSDVQHR
ESKAGKGWAIFTVEDYDDSYDFKIFGEEYLKWRHFLVPNSFIYGRVLVKEGWTNRETGKK
SDPRLQYNSVQLLHDVMETHGKKLTISMPLSDLKDGRIDSLKNLVKTHKGEKQLFFVVYE
KDEKIHLTMPSRNHKINISKELLDELEKEQVRYKLN
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaatcttcgatacagaaaccacaggccttccaaaacgttacaacgctcccgtg
agcgatagcgataactggccacgctgtatccagattgcttggcagcttcacgatgaaatg
ggggatatgattgagcatcaagattatttggtgcagcccgaaggtttcaacattcctttt
gatgctgaaaaaatccacggaatttcaaccgaattggcaacttctgaaggaatttccttg
gaagaaatgattgaaaaattcaaaattgcgctttcaaaaacaaaattcattgttggtcaa
aacctaggtttcgatgtaaatattatgggcgcggaatttttccgtttaggaatagaaaac
ccgttaccaaattttccagttttggatacgtgtacggaaaccaccgcccaattatgtcag
attcctggtggtcgtggcggaaagtctaaattgccaacattaaccgagcttcacgaatat
ctttttagcgaaccttttgccgaagcacataatgcaacagcagatgttgaggccaccaca
cgttgttttctagaattggttcgtcgtcaaattttcacgaaagaggaacttgatgtacag
ccagattatttcgaaaatttttcagaagaaaacccaaaaatcattcagcttattgggctg
aaacatataaatcttaaaaaagcttcagaaaaaattcggaagcaaatgcaggccgtttca
gaaaaagaggaaatctcttccgaagaaataaaagaaaatattgccacgctagaagatgct
ccgtttgtgcaccttcacaatcattctcagttttcaattttgcaatccacttccagtacg
atagatttggtgaatgcagccgttgaaaataatatgtccgccgttgcaatcacggatacg
ggcaatatgatgggcgcatttcactttgtacaagccgtttctaattacaataaaacctta
gctgacttacctaaaaatgatgaggaagaaacttcaccagaacctttaaaagcgattgta
ggttgcgaattcttcgtttgcgaagatcatctcaacaaaaaccacaaggacaacggctat
caaattgtaatgctcgccaaaaacaaaagcggctaccacaatttggcgaaaatggcttca
atcgcatacaccgaaggtttttattatgtccctcgaatcgataaaaatattgtagaaaag
tacaaagaagacatcattgttttaactggaagtctttatggcgaagtgcctggaaaaatt
ctaaacataggcgaaaaccaagctgaggaagcacttctttggtggaaagaaatgtttggt
gaagacctttatgtggaaattatgcgccacgaccaagaagacgaaaagcgcgtaaacgat
gttttggttgaaatggcgcagcgcaataatgtaaaactcgttgcttgcaacaacacttat
tatattgacaaagaagacgccaacgcgcacgatattttactttgcgtaaaagatggtgaa
aaacaggcaacgccaattggtcgtggtcgcggatatcgttacggtttgccaaatcaggaa
tactattttaagtcgcaggatcaaatgaaagtcctttttaaagatcttcctgaagcaatt
tcgaatattgaagaagtagtttcaaaaattcaacctttttcattgcatcgtgacgttttg
ctacccaatttcggtatcccaaaaaaatttttaaaaactgacgatattgacggtgggaaa
cgtggtgagaatgcctatttacgctatctaacctatgaaggcgccaaaagacgctatcca
gaattaatagaagtttcttatgaagcacttacaagttttgagcttccagaaaatgcttca
gagcgcgtaaaagaaattaagcaacgtctcgattttgagttggatgtaatcgccaataca
ggttatcctggttactttttgattgtacaagattttattgccgaagcacggaaaatggat
gtttccgttggcccaggacgtggttctgcggcgggaagtgctgttgcctactgcttggga
atcacaaatatttgtccaataaagtacgatttgctttttgagcgtttcctaaacccagat
cgtgtaagtatgcccgatattgatattgattttgatgatgaaggccggagcaaggttatg
gattacgtaatcaacaaatacggaagtaaccaagtagcgcaaattatcacttatggaact
atggcagcaaaatcctccattcgcgatacagcgcgggttttagatttaccgttgaatgac
gccgacagaatttcgaaactcattccaaacatgactaaactgaacaaaattttcggtttg
agtgatgcggaactgcgaggtcgttttcgaagtgatgaacttccaaaagtgcacgaactt
ctaaatctttccaaaggaagtgatctggaagcgcaaaccataaatcaggctaaagtgctt
gaaggttctgttcggaatactggaattcacgcttgtggtgtaattattacgcctagcgat
attacagattttgtacccgttgccactgcaaaagattcagatttatatgtaacccaattt
gacaactcggttgttgaaagtgcgggacttctaaaaatggatttcttgggtttaaaaacg
ttgacacttataaaagacacggttaaactcgtaaaacacaagcacgatattgatctggat
ccagatgtttttccgcttgatgatgaaaagacatacgagcttttccaaagaggagaaaca
gttgggatttttcaatatgaatctgccggaatgcagaaatacatgaaggaattaaagcca
acggtttttgcggatttaatagcaatgaacgcgctttaccgtccgggcccgatggaatac
attccgagtttcgtaaaaagaaagcatggcgaagaagaaatagaatatgaccttcctgga
atggaagaatatttaaaagaaacctacggaattacagtttaccaagagcaggtgatgttg
ctttcgcaaaaattagcaggctttacaaaaggtgaagcagacgttttgcgaaaagcgatg
ggtaaaaagcaaaaatcggtgctcgacaaaatgaaaccgcaatttgttgctcaagcttcg
gaaaaaggccacgatgcagaaaagttagaaaaaatctggaaggattgggaagcttttgcg
agttacgctttcaacaaatctcactccacttgttatgcttggattgcttaccaaacagcc
tatttaaaagcacattatcctgcggaatatatggctgcggtgctttcaaataatatgagc
gatataaaacaagtcaccttttttatggacgaatgtaagcggatgggaatgaaagttttg
ggaccagacgtaaatgaatctttccacaaatttacagtgaacgatcaaggagcaatccgt
tttggaatgggtgccgtaaaaggtgtgggcagcagcgccgtttcaacgattgttgaacat
agaaaagacgggaaatacaaatcggtttttgatttggcaaagcgaattgacctgcgttcc
gcaaataaaaaagcatttgaaaacttagcattggcgggtggttttgatagtttcgatgcg
catcgagcgcaatatcttcacgacgatggcgatggagtaatgtttttggaaaaagtgttg
cgttatgccgcaaagtatcaggaaacgcagaactcttcacaagtaagtctatttggcgat
gctagcgaagtacaaattcctgagcccgaagttccaccttgtgaggaatggggcacgatg
aaaaaattgagacaggagcgcgaagtggttggtgtatatatttcaggccatccgctggat
gattttaaaatagaaatggacagttttacaaattgcaaggtttcaaattttaatcatttg
gaggattatcttaataaagaaatgtgctttggaggtgttgttagtgatgttcaacaccga
gaatcgaaggctggaaaaggttgggctattttcaccgttgaagattatgacgatagttac
gatttcaaaatttttggtgaagaatatttaaaatggcgccatttcttggttccaaacagc
ttcatctatggacgggttttagtaaaagaaggctggacaaatcgtgaaactggtaaaaag
agtgacccacgccttcaatataatagcgttcaattacttcacgatgttatggaaacgcac
ggaaaaaagttaacgatttcaatgccgttgagcgatttgaaagatggacggattgattca
cttaaaaatctcgtaaaaacccataaaggcgaaaaacaattgttttttgtggtttatgaa
aaagacgaaaaaattcatcttactatgcctagccgaaatcataagatcaacatatccaag
gaattattggatgagcttgaaaaggaacaggttcggtataagttgaattga
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