Aequorivita sublithincola: Aeqsu_1933
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Entry
Aeqsu_1933 CDS
T02132
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aeqsu_1933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asl03021
]
Aeqsu_1933
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_1933
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aeqsu_1933
Transcription machinery [BR:
asl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Aeqsu_1933
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Aeqsu_1933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Peptidase_S80
Motif
Other DBs
NCBI-ProteinID:
AFL81407
UniProt:
I3YWN9
LinkDB
All DBs
Position
2068737..2069729
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFSFQKPDKVIMVNSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIDEIDNETVTISMSGKDQLKAGDFQKFIS
GFQVLNPEMVLCNMDKKVSLNFEITIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENFRVEQKTDYEKLVFEIVTDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLAKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttagttttcagaagcctgataaagttataatggtaaattctaccgatttc
gaagggaaatttgaatttcgtcctttggaaccaggttacggacttaccgttggtaacgca
ttaagacgcgtattactttcctctttggaaggattcgccattacttcggttcgcatcgaa
ggcgtggatcacgaattttctaccatcgctggagtagtagaagatgttaccgaaattatt
ttgaaccttaaacaagttcgtttcaaaagacaaatagacgagatagataatgaaaccgtt
actatttcaatgtctggaaaagatcagttaaaggcaggagatttccaaaaattcatttca
ggttttcaagtattgaatccagaaatggttctttgcaacatggacaaaaaagtgagcctt
aatttcgaaattactatcgaaaaaggtcgtggttatgttcctgctgaagagaacaaaaaa
gcgaatgctcctttgggaaccatctttacagattctatctacacaccaataaaaaatgtg
aagtacagcattgaaaacttccgtgtagagcaaaaaacagattacgaaaaattagttttc
gaaatcgttacagacggatctattcatccaaaagatgctttaactgaagctgcaaaaaca
ttgattcaccactttatgttgttcagcgatgagcgcattactttggaggccgatgagatt
gcgcaaactgaaacgtatgatgaagaatcccttcatatgcgtcagttgcttaaaacaaaa
ttagtagatatggacctttcagttcgtgcgctaaactgtttgaaagctgcagaagttgat
acattgggagatcttgtttctttcaacaaaaatgacttgatgaagttccgtaacttcggt
aaaaaatcgcttactgagcttgaagagcttgtaaacgtgaaaggcctgaacttcggaatg
gatcttgcaaaatataaattagataaagactag
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