Aequorivita sublithincola: Aeqsu_2087
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Entry
Aeqsu_2087 CDS
T02132
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03030
DNA replication
asl03430
Mismatch repair
asl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aeqsu_2087
03430 Mismatch repair
Aeqsu_2087
03440 Homologous recombination
Aeqsu_2087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_2087
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_2087
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aeqsu_2087
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aeqsu_2087
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aeqsu_2087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AFL81550
UniProt:
I3YX32
LinkDB
All DBs
Position
2259009..2259782
Genome browser
AA seq
257 aa
AA seq
DB search
MELKLKKPICFFDLETTGVNVAKDRIVEIAIQKVFPNGNEESHTWRVNPEMSIPAESSAI
HGITDEMVADEPTFKELAAKVYALIKDSDLGGFNSNRFDIPLLAEELLRAEIDFDLKKSL
SVDVQTIFHKMEKRTLEAAYKFYCDKDLKDAHSAAADTNATYEVLKAQLDRYSELENDMS
FLADFSSHKDHADFAGFVSYNEDGVEVFSFGKYKGQLVTDILDKDSGYLGWLLNADFPLY
TKKVLTRIRLQKLNTKQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaaattaaaaaaaccaatctgctttttcgatcttgaaaccacaggtgttaat
gtagcaaaagacagaattgttgaaattgctattcaaaaagtatttccaaacggaaatgaa
gaaagccacacttggcgcgtaaacccagaaatgtccattcccgcagaatcttccgcaatt
cacggaattactgatgaaatggttgccgatgaacctacgtttaaagaactagccgcaaaa
gtatatgctttgattaaagatagcgatcttggtggattcaactccaaccgttttgatatt
ccgctgctagccgaagaactgcttcgtgctgaaattgatttcgatttaaaaaaatcactt
tcggtagatgtgcagactatattccacaaaatggaaaaacgaactttagaagcagcatat
aaattttactgtgataaagatttaaaagacgcacatagtgcagcagcagatacaaatgct
acttatgaagttttaaaagcacaactagatagatatagtgaactggagaacgacatgagt
tttttagcagatttcagctctcataaagatcatgccgactttgctggatttgtcagttat
aacgaagatggtgttgaggttttctccttcggaaaatataagggacaattagttacagat
attttagacaaagattctgggtatttaggctggttgttaaatgcagattttccgctttat
accaaaaaagtcctaactcgtattaggcttcaaaagttgaacacaaaacaataa
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