Aequorivita sublithincola: Aeqsu_2340
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Entry
Aeqsu_2340 CDS
T02132
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03420
Nucleotide excision repair
asl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aeqsu_2340
03430 Mismatch repair
Aeqsu_2340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_2340
Enzymes [BR:
asl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aeqsu_2340
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aeqsu_2340
MMR (mismatch excision repair)
Other MMR factors
Aeqsu_2340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
ResIII
nSTAND3
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFL81800
UniProt:
I3YXT2
LinkDB
All DBs
Position
2534245..2536566
Genome browser
AA seq
773 aa
AA seq
DB search
METYLEQLNDAQRAPVLQKDGAMIVIAGAGSGKTRVLTFRIAYLMSQGVDPFNILSLTFT
NKAAREMKNRISKIVGSSEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSQSV
IRAVIKEMHLDKDVYKYKQVYSRISSYKNSLITVKAYFSNSDLMEADAMAKMPRLGDIYK
SYVDKCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDEVKVFRLEQNYRSTKNIVNAANN
IIEKNKTRLEKVVWTANDEGAKILVNRTMTDGDEGRFVASSIFENKMNHQMKDGDFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLSYLRLVLNPKDEEALKRVINYP
ARGIGGTTIDKLIVAANHYNRSIFEVMKNIDKIDLKINSGTKTKLQDFVTMIESFQVLNQ
NYDAFTITEHVSKKTGLLQELKKDGTPEGIARIENIEELLNGMRDFVEEQKEIADATGSL
SEFMEDVALATDADSDKGDSDRVALMTVHLAKGLEFPYVYIVGMEEDLFPSGMSMNTRSE
LEEERRLFYVAVTRAEKQAYLTYTQSRYRWGKLIDAEPSRFIEEIDESFLEYLTPITENR
YKPLLDADIFDDVDHSKLRLKKPVSSKAPMGPTEDQLRKLRRLKPVTSDTDKNFNAEDAN
LNVGTIVEHVRFGKGKIKSIEGLGADTKAEIDFENGGLKKLLLRFAKLKVVNS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacatatttagaacaacttaacgatgctcagcgtgcaccagtgctgcaaaaagat
ggcgcgatgatagttatagctggagctggttcgggcaagacacgcgtgcttacatttcgt
attgcatacttaatgtcgcaaggtgttgacccatttaatattttgtcgctgacctttacc
aacaaggcggcacgtgaaatgaaaaaccgtatttcaaagattgtaggttctagtgaagcc
aaaaatctttggatgggaactttccacagtatttttgcgaaaatccttcggtttgaagct
gataagttgggctatccttcaaattttacaatttatgatactcaagattcccaaagtgtg
atacgtgcagtcatcaaggaaatgcacttagacaaagatgtatataaatacaagcaggtt
tattcgcggatttcttcctataaaaatagcttgattaccgtaaaggcatatttcagcaat
tcagatttaatggaagccgatgcaatggcaaaaatgccacgtttgggcgatatttataaa
tcttacgttgacaaatgcttcaaagctggggctatggattttgatgatttacttttgaaa
accaacgaacttttaactcgttttccagaagtcttagcaaaatatcaaaaccgtttccgc
tacattttggtggacgagtaccaagatacaaatcacagtcagtatttgatagtaagagca
ctttcagataagtttcaaaatatatgtgttgtaggcgatgatgcgcagagtatctatgct
ttccgaggcgcgaacatcaacaatatcctgaattttcagaaggattatgatgaagtaaaa
gtatttcgattggaacagaattaccgttccacaaaaaacatcgtaaatgccgcaaacaat
attattgaaaagaataaaaccagactcgaaaaagtagtttggacggcgaatgacgaaggc
gctaaaattctcgtaaaccgaacaatgactgatggtgacgaaggtcgttttgttgcgagt
tccatttttgaaaacaaaatgaaccatcaaatgaaagatggtgattttgcaattttatat
agaacaaacgcccaaagtcgtgcaatggaagatgcccttcggaagaaagacattccatac
agaatttacggcggactcagtttttatcaacgaaaggaaataaaggatgtcctgtcttat
ttacgattggttttaaacccgaaagacgaagaagcccttaaacgcgtaatcaattatccc
gcacgtggaattggaggaactacaattgataaattgattgttgctgcaaatcattacaat
cgttcaatttttgaagtgatgaaaaacatagataaaattgatttgaagataaattctgga
accaaaaccaagttacaggatttcgtgacgatgattgaaagttttcaggttttgaatcaa
aattatgatgcttttacaattactgagcacgtttccaaaaaaactggtttacttcaagaa
ctgaagaaagacggcacgccagaaggaatcgctcgcattgaaaatattgaggaattatta
aacggaatgcgcgattttgttgaagaacaaaaagaaatcgccgatgccacaggctcgctt
tcagaatttatggaagatgttgccctcgccacagatgcagacagtgataaaggcgatagc
gaccgtgtagcactgatgaccgtccatttggcgaaaggtttggaatttccgtacgtttat
atcgttgggatggaagaagatcttttcccaagcgggatgagtatgaatacccgcagcgaa
cttgaagaagaacgaagacttttctacgttgccgtaactcgtgccgaaaagcaagcctat
ttaacttacacccaatcccgctatcgttggggaaaattgatagatgccgaacccagccgt
tttattgaagaaattgatgagagttttttggagtatttaacgccaatcactgaaaatcgt
tacaaaccattacttgatgcggacatttttgacgatgtggaccacagcaaactcagattg
aaaaaaccagtttcaagcaaagcgccgatgggaccgacggaagatcagcttcggaaactg
cgaagattaaaacccgtaactagtgacaccgacaaaaatttcaatgccgaagatgcaaat
ctaaatgttggaacaatagtggaacacgttcgtttcggaaaaggaaaaattaaaagtata
gaaggcctaggcgcagacacaaaagctgaaatagatttcgaaaatggtggtttaaagaaa
ttactgcttcgtttcgcgaagctaaaggttgttaattcgtga
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