Aequorivita sublithincola: Aeqsu_2955
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Entry
Aeqsu_2955 CDS
T02132
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
asl
Aequorivita sublithincola
Pathway
asl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aeqsu_2955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_2955
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aeqsu_2955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aeqsu_2955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND1
nSTAND3
AAA_25
MeaB
Viral_helicase1
AAA_21
cobW
NMDAR2_C
PRK
Motif
Other DBs
NCBI-ProteinID:
AFL82396
UniProt:
I3YZH8
LinkDB
All DBs
Position
3201271..3204102
Genome browser
AA seq
943 aa
AA seq
DB search
MLKNEDFIEVLGARVHNLKNIDVRIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLFYARAS
DAYSYNTGQKMVSYSDEQIRQLILEDFSDKKVSILAPVIRSRKGHYRELFEQIAKQGFLK
VRVDGEVRDIVKGMKVDRYKNHDIEIVIDRLKVSTEADNSKRLSETINTAMYHGDDVLMV
LDNETDQARYFSRSLMCPSSGISYPNPEPNNFSFNSPKGMCPNCKGLGKLYEVNLKKLVP
NPKLSIKQGALAAHGPQKGNWVFKQLELIAQNFNFKLTDSFESIPQKAKDVIFFGGNEMF
NVESKDLGITRNYKIDFEGVATFIQNTFDASETTSLKRWAKEYMDKIPCPECNGTRLRKE
SLYFKVNDKNIAELAHMDIVELAEWFANLEKNLSETQQKIASEIIKEVRSRLQFLLDVGL
NYLALDRGSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNERLIYSLKQLR
ELGNSVIVVEHDKDMIESADYVIDIGPAAGKYGGEIVSEGTPKEIEEHDTLTADYLNGRR
KIEIPEKRREGNGKTLTLKGATGNNLKNISVTFPLGKMIGVTGVSGSGKSTLINETLYPI
LNAHFFNGVKKPMPYKKIEGLENIDKVIDINQSPIGRTPRSNPATYTGLFSEVRNLFART
PEAMIRGYKPGRFSFNVAGGRCETCKGAGLRVIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSIFDVLAMTINEACPFFENIPKIYRKVKTIQDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMIVLNKLVDKGNTVLIIEHNLDVIKTV
DYVIDIGPEGGKQGGKIMALGTPEEIAEDKKSYTARFLKKELL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaatgaggattttattgaagttttgggcgctcgcgttcataacttaaagaac
attgacgttcgtattccaagagaaaaattagtagtaattacaggtctttccggtagcgga
aaatcctcattggcgtttgatactatttatgccgaaggtcagcgtcggtatattgagact
ttttcggcttacgcgcgccaattcctcggaagtttagaacgtcctgatgtagataaaatt
gacggactttctccagtaattgcgattgagcagaaaactactagtaaaagtccgcgttct
accgttggcactattacagaaatttacgattttctgcgtcttttttacgcccgtgcaagt
gatgcatacagttacaacactggccaaaaaatggttagttatagtgatgagcaaatacga
caactaattcttgaagacttttctgataaaaaggtaagcattctagctccagtaattcgc
tctcgaaaaggtcattatcgtgagctttttgagcaaattgcaaagcaaggttttctgaaa
gtccgcgtggacggcgaggttcgtgatattgtgaagggaatgaaagtggatcgttacaaa
aatcacgacattgaaattgtaattgatcgactaaaagtttcaactgaagctgataattcc
aaaagactttctgaaaccataaacactgcaatgtatcacggcgatgatgttttgatggtt
ttagataatgaaacggaccaagcccgttatttcagtcgttcgttgatgtgtccttcatca
ggaatttcatacccaaatccagagccgaacaatttttcattcaactcaccaaaaggaatg
tgtcccaattgtaaaggattgggaaaattatatgaagtaaatcttaaaaaactcgttcca
aacccaaaactttccataaaacaaggagctttggcagcgcacggacctcaaaaaggcaat
tgggtttttaaacagttggaattgattgcacaaaatttcaattttaaactgacagattct
tttgaaagtattccgcagaaagccaaagacgttatctttttcggtggtaatgaaatgttt
aatgttgaatctaaagaccttggcattactcgtaattataaaatagattttgaaggagtt
gcaacctttattcaaaatactttcgatgctagtgaaactacttcattgaaacgttgggcc
aaggaatatatggacaaaattccttgtccagaatgcaacggaacacgacttcggaaggaa
tcactttactttaaagtgaacgacaaaaacatagccgaactcgcccatatggacattgtt
gagttggcagaatggtttgcaaatcttgaaaaaaacctttcagaaacacaacaaaaaatt
gcttcagaaatcattaaagaagtgcgttcaagacttcagtttttactagatgttggactc
aattatttagccttagaccgcggttcaaaatcactctcgggtggcgaagcacaacgaatt
cgtttagctacacagattggctcacagttggttggcgtgctttatattcttgatgaacct
agtattggcttacatcagcgcgataatgaacgcttaatttattccttgaaacaacttaga
gaacttggcaattccgtaatagttgtagagcacgacaaagacatgattgaaagcgccgat
tatgttatcgatattggtcctgcagccggaaaatacggtggcgaaatagtttctgaagga
accccaaaagaaatagaagagcacgatacgctaaccgcagattatttaaacggaagaaga
aaaattgaaattccagagaaacgacgagaaggaaacggaaaaaccttaacgctaaaaggc
gcaacgggaaacaatttgaagaatatttcagttactttcccattaggcaaaatgattggc
gttacaggagtttcgggcagcggaaaatctacactcataaacgagaccctctaccctatt
ctaaatgcacattttttcaacggtgtaaaaaaaccgatgccctataaaaaaattgaagga
cttgagaatattgataaagttatagacattaatcaatcgcctattggaaggactccaaga
agcaatccagcgacttatacaggtcttttttcagaagtaagaaatctttttgcaagaaca
ccagaagctatgattcgtggttacaaacccggacgttttagtttcaatgttgcaggcgga
agatgcgaaacctgcaaaggcgcaggtttacgagttattgaaatgaatttcctgccagac
gtttatgtggaatgtgaaacttgtcaaggaaaacggtttaaccgtgaaactttggaaatt
cgttataaaggaaaatctattttcgatgttttggcaatgactattaatgaagcttgtcct
tttttcgaaaacattccaaaaatatatcgaaaagtaaaaaccattcaagacgttggttta
ggttatattaccctcggccaacagtccacaactctttctggcggcgaagcacaacgaatt
aagctagcaaccgaactctccaaacgcgatacaggaaacaccttctatattctagatgaa
cccacaactggccttcattttgaagacattcgcgttttgatgatagttttgaacaaattg
gttgacaaaggaaatacagtactaataattgaacacaacctagacgtaatcaaaacggta
gattacgttatagatatcggtcctgaaggcggaaaacaaggcggaaaaataatggcgctc
ggcactccagaagaaattgcggaagacaaaaagagctataccgcccgattccttaaaaaa
gaattactttag
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