Aequorivita sublithincola: Aeqsu_3118
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Entry
Aeqsu_3118 CDS
T02132
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03030
DNA replication
asl03430
Mismatch repair
asl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aeqsu_3118
03430 Mismatch repair
Aeqsu_3118
03440 Homologous recombination
Aeqsu_3118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_3118
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_3118
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aeqsu_3118
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aeqsu_3118
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aeqsu_3118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AFL82553
UniProt:
I3YZY5
LinkDB
All DBs
Position
3390089..3393079
Genome browser
AA seq
996 aa
AA seq
DB search
MYLNCHSYYSLRYGTFSESTLLELAKENGITQLALTDINSTSACLSFIKQAQEHNIHSVV
GVDVRNGVDQLYILIAKNNEGFSEINTFISEHLHIKKLFPDVAPKFENCYCIYPFEKAME
IKSHTFSEYEFIGISIKNLNRLPFSPFNKMMDKLVIHQTVSFRNQSDYNAHRLLRTIDLN
TLLSKLPLSEQGDKTDVLLAPELVKVKYQEYPELLFNTDKLLKSCKVNFYFDEHRVNQNQ
IIYGEDKDSDYTILEELCYNKIKERYKNPKMEVYERVEKELAAIKQMDFVSYFLINNDIL
DYARSKDYPYIGRGSGANSVVAYIIGITNVDPIELDLYFERFINVYRSSPPDFDIDFSWK
DRDDITDYIFRRFKNTALMGTYVTFQYRAVIRELGKVFGVPKFEVDSFLKGYKVKKSASS
AYIQLIEKYAHYIHGFPNYLSVHSGGIIITQKPIYYYTSTFLPPKGFQTVQFDMNIAEEV
GIFKFDILAQRGLSKIKDTLEILAYNQPETDVLDMEDIEVFKNDPNINKLLNTGDCMGVF
YVESPAMRTLMTKLQTNDYLNLVAASSIIRPGVSNGGMKNEYILRHRIPEKRKEAHPVML
EILEDTYGVMVYQEDVLKVAHKFAGLSLAEADILRRGMGGKVKSKGQFEQIEKKFISYCL
KKGYSETLTNEVWNQIKAFAGYAFAKGHSASYAVESYQSLYLKKYFPLEFMTAVLNNGGG
FYNIETYIHEIKMQGGTVEAPCINKSDHGNKIYGEAVFLGLGMLKSLEFRAIQSILNERD
VYGKFSGFDDFVDRVKIGIEQIIILIRIDAFRFTGADKHTLLWEAHLKLDKNKTQNPYPV
LFKPKQITYDIPEIKSTTVIDAYDQIELLGFPLHSRFNLLAAPLPTDFKAKDMVAYVNRK
ITICGKLVTAKGTPTKDKRLMHFGTFYDSEGVFFDTVHFPNIAEKFSISSEGIYVVRGKV
VDDLGCLAIIVDYIQHLEMIPDPRFEDADKSVKLMD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttaattgccattcgtattattcgcttagatatggaactttttctgaaagcaca
cttttggaattggcgaaggaaaatggcattacacaacttgcacttacagatattaatagc
accagtgcttgcttaagctttattaaacaagctcaggaacacaatattcacagcgtagtt
ggagtggatgttcgtaatggtgtggatcaattatatattttgattgcgaagaacaatgag
gggttttcagaaataaataccttcatttcagaacatcttcatataaaaaagctattcccg
gatgttgcacccaaatttgaaaattgttattgtatctatccctttgaaaaggcgatggaa
attaagtcgcatactttttcagaatatgaatttatcggcatttcaattaaaaacctaaat
cgtttaccattttctcctttcaataaaatgatggataaattggttattcaccaaacggta
agttttagaaatcaatcagattataatgcgcaccgattgttgcggactatagatttaaat
acccttttaagtaaacttccgctctcggaacaaggtgataaaacggatgtgcttttagct
ccggaattggttaaagtgaaatatcaggagtatccagaattacttttcaatactgacaaa
ctactgaaatcctgcaaagtaaatttctattttgatgaacacagagtgaatcaaaatcaa
attatttatggggaagataaagattcagattacacaattttggaggagctgtgctataat
aaaatcaaggaacgctacaaaaatccaaaaatggaggtttatgaacgggtcgaaaaggaa
ttggcggccatcaagcaaatggattttgtttcctatttcctaataaacaacgatatttta
gattatgcccgttctaaagactatccatacattggtcgcggaagtggcgccaatagtgtt
gttgcgtatataattggcattacgaatgtagatcccattgaactggatctttattttgag
cggtttataaatgtgtaccgtagcagtccgccagatttcgatattgatttttcgtggaaa
gaccgagatgatattaccgattatattttcagaagatttaaaaataccgccttgatggga
acctatgtaacttttcaatatcgcgcggttattcgcgaattgggcaaagtgtttggggtt
ccaaaatttgaggtggacagttttctaaaaggctataaagtaaagaaaagcgccagtagt
gcttatattcaactgattgaaaaatatgcgcattatattcatggttttcctaattatctc
agcgtgcattccggcggaattataataacccaaaagccaatttattactatacaagtact
tttttgccaccaaagggttttcagaccgttcagtttgatatgaatatcgctgaagaagtt
ggcatttttaaattcgatattctcgcgcaacgcggactgtcgaaaattaaggatactttg
gaaatattagcatacaaccaacctgaaactgatgtgctggatatggaagatatagaggtt
tttaagaatgatcccaatataaataaattgcttaataccggagattgtatgggcgtgttt
tatgtggaatcgcccgcaatgcggactttgatgacgaaactacaaaccaacgattatctt
aaccttgtggctgcaagtagtattattagacctggcgttagtaacggcggaatgaaaaat
gaatatattctgcgccaccgaattcccgaaaagcgtaaagaagcgcatcctgttatgctc
gaaattttggaagatacctatggcgtaatggtttatcaggaagatgtgctaaaagtggcc
cacaaatttgccggactctccttggcagaagcagatattttaaggcgcggtatgggtggt
aaggtaaaatcgaaagggcaatttgagcagatagagaaaaagtttataagctattgctta
aagaaaggatattctgaaaccctcaccaacgaagtctggaaccaaataaaagcctttgcc
ggttatgcctttgcgaaaggtcattccgcatcttatgcggttgaaagctaccaatcgctc
tatctaaaaaaatattttcctttggaatttatgacggctgttttaaacaacggcggtggt
ttttataatattgaaacctatattcacgaaattaaaatgcagggcggcaccgtggaagca
ccttgcataaataaaagcgatcatggtaataaaatttatggcgaagccgtttttctaggt
cttggaatgttgaagtcattagagtttagggccattcaatctattttgaacgaacgggat
gtttacggtaaattttcgggttttgatgattttgtagatcgtgtgaagattggtattgaa
cagattataatattaattcgcatcgatgcatttcgatttactggagccgataagcatact
ttgctctgggaggcccatttaaagttggacaaaaacaaaacccaaaatccgtatcccgtt
ctttttaaacctaagcaaattacctacgatattcctgaaataaaatctacaacggttatt
gatgcatacgaccagattgaattattgggctttcccttacactcaagattcaatctttta
gctgcgcccttgcccacggattttaaggcgaaagatatggttgcatacgtaaatagaaaa
ataacaatctgcggaaagttggtaaccgccaaaggcacgccgacaaaagacaaacgctta
atgcacttcgggactttttacgatagtgagggcgtattttttgataccgtacacttcccg
aatattgcagaaaagtttagcataagctctgaaggtatttatgtggttcgcgggaaagtt
gtggacgatttgggatgtttggcgattattgtagattacatacaacatttagaaatgatt
ccagatccaagatttgaagatgcggataagagtgttaagttgatggattaa
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