Aequorivita sublithincola: Aeqsu_3215
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Entry
Aeqsu_3215 CDS
T02132
Name
(GenBank) DNA polymerase III, alpha subunit (gram-positive type)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asl
Aequorivita sublithincola
Pathway
asl03030
DNA replication
asl03430
Mismatch repair
asl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aeqsu_3215
03430 Mismatch repair
Aeqsu_3215
03440 Homologous recombination
Aeqsu_3215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asl03032
]
Aeqsu_3215
03400 DNA repair and recombination proteins [BR:
asl03400
]
Aeqsu_3215
Enzymes [BR:
asl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aeqsu_3215
DNA replication proteins [BR:
asl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aeqsu_3215
DNA repair and recombination proteins [BR:
asl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aeqsu_3215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
Rv2179c-like
T5orf172
DUF7508
DEDDh_C
VIGSSK
Motif
Other DBs
NCBI-ProteinID:
AFL82644
UniProt:
I3Z076
LinkDB
All DBs
Position
3485833..3487212
Genome browser
AA seq
459 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYRFDGHEIVDQFSSLVNPEKPIQPFVVNLTGINNEM
LRNAPKFYEVAKRIIEITDGCIMVAHNALFDNRILTTEFDRLGYPFEKQTLCTVELAKKL
IPDMPSYSLGKLVRSLGIPLTDRHRAQGDAKATVALFKMLLAKDISKEIITETLKKDPKR
QLAPKLLDIIQNIPSETGVYYMHNEAGNVIYIGKSKNIKKRLTQHFTSDNRKSKKIQHEV
KLVSFEKTGSELIALLKESEEIKQNKPLFNRGLKRSNFSHQLTSFVDENGYINLQIEKAD
GRKKAITTFSNYQQAKTALFKITEENQLCQKLTGLYETKKQCFNYTILECFGACINKESV
TEYNNRVQTFLDKRSYENLNMLIIDRGRDVGERSVILIENGVYKGYGFYNLNHQINNPEI
LKSIINPMQNNRDAQHIIQNYLRRNKVLKTVNLSANMAN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaattttagacatagaaactacgggcgggaaatacaatgaggaaggaattacc
gaaattgcaatttacagatttgatggtcacgaaatcgttgaccagttctcaagccttgtg
aatcctgaaaaaccaattcagccgtttgttgttaacctaacagggattaataatgaaatg
cttcggaatgctcccaagttttacgaagtggcaaaacgcattatcgaaatcacagatggt
tgcattatggttgcgcacaacgcccttttcgacaatagaattctcactacagaattcgac
cgtctaggctatccttttgagaaacaaacgctttgtactgttgaattagcgaagaaactg
attccagatatgccctcgtatagtttgggaaagttagttcgttcattaggaatcccgctt
accgatcgtcaccgcgcacaaggcgatgcaaaggcaactgtagctctttttaaaatgttg
ctagctaaagacatttcaaaagaaataattacagaaacccttaagaaggacccaaaacgt
caattagcgccaaaactgttggatattattcaaaatattccttcggaaactggtgtttat
tatatgcataacgaggcaggaaacgtaatttacattggcaaaagcaaaaacatcaaaaaa
aggttaacacagcattttacgagcgataaccgtaagtcgaaaaaaattcagcacgaagta
aaattagtctcctttgaaaaaacaggtagcgagttaattgcacttctaaaggaatctgaa
gaaatcaaacaaaacaaaccattgttcaatcgaggtttaaaacgttcaaatttctcacat
caacttacttcttttgtagatgaaaacggctatataaatcttcaaattgaaaaagcggac
gggcgtaaaaaagccattactactttcagtaattatcagcaggcaaaaacggctcttttc
aaaataacagaggaaaaccaactttgccaaaaactaacgggactttacgaaaccaagaaa
caatgtttcaattatacaattctagaatgctttggagcctgcataaataaagagtccgta
accgaatacaataatcgggttcaaacttttttagacaaacgcagttatgaaaacctgaac
atgttaattatagaccgaggtcgcgatgttggggaacgttccgtaattttgattgaaaac
ggagtttataaaggctatggtttttacaacttaaaccaccaaataaacaatcccgagatt
ctgaaatctatcattaacccaatgcagaacaatcgcgatgcacagcatattattcagaac
tatctacgaagaaataaggtgctaaaaacggtaaacctttccgcaaatatggccaattga
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