Actinomyces slackii: NCTC11923_00817
Help
Entry
NCTC11923_00817 CDS
T06783
Name
(GenBank) putative DNA helicase
Organism
asla
Actinomyces slackii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4011
AAA_12
MTES_1575
AAA_11
AAA_30
AAA_19
SLFN-g3_helicase
DEAD
AAA_22
DUF3320
nSTAND3
DUF4145
MeaB
NAT10_TcmA_helicase
nSTAND_NTPase5
ATPase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
VEG74195
UniProt:
A0A448KB93
LinkDB
All DBs
Position
1:997160..1002778
Genome browser
AA seq
1872 aa
AA seq
DB search
MTPDNHDLVLRGLLRVLPAQLRVFTERALKAAGRSASQRALAAARRDSHSVDLEDLSTQI
RILTARGEDSRLLLALPPGLASKLHEVRRLRNDAVHGRLGADRALACLVAVSETLWMIGA
SDGPRQEVRDLIAALDGGRGPALSPLDAVGIGVRCEAVLGYAHALAGLTLTAVLDLSLAG
GWAPTRADAPGPADGMAAMSSPGRGSGAAGDLGVVELRVSVVEHGGDREITAPQTLAWDI
SQGDRRLTANLPLVAGELLQIDEDCAAELCVEITDTQGRTQARHLQGLAALAPRRWRMSG
GSRWAGAALATFVQPDQAALARIARTVTNRVRRDPVPDAVAGAVCTEVRRLGLRVDGDAA
AWADAPRSLRTAAEVLDVGVGSALDIALLIAGLLERLEIPAALLLTEREVFVAYVRDGGG
MPALAPGQVAGLVERGELGVINPLLAVKARTAMVHSLEATRRRRALAALGGVVLALDLGG
ARAAGARPQPGLARREDDRVVEFDAVAPAQDIADEAGPGADAADTAEEPEPRAQEPASPT
GSPAAGSAPPSEVEDWKRSLLDLTLRNPLISRHSRSAIALSLPPHLLGSLEDLVNQQDQL
VLERADAGQATAEDLLAQRRVRTELEGTEHERRLASMDALARTTIEETGANNLYLALGTL
EWESVGKPLRSPLMLVPVTIVHEGQTFGIRLDEAETSTPNFSLLERLKADVGIDLGELRQ
PVRDSHGIDVGATLEAVTERLAQVLPRARVEPTAHLGLFRFSTYRMWKDLEEHWPALIAG
PVAGLLGQGPGRGDTASGDTAGGGTDGGPAPHPGRGPAPEAPEDLDALIEGLPLDADSSQ
ARVVADAVAGRSLVVEGPPGTGKSQTVANLIFEAVARGRTVMFVAEKASALEVVARRLRE
EVGIGDLLLNLHDNGMRPKTVREGLRRSLEAGADEPAGQSGDPRALRDRLAGLRADLEGY
RRSLHGPQDGASYYEAHDAVIGAQGENLRAARERLAETGRRLGLDSFDAADHARLLQEYR
ATRDALRALAPREVLARVTRNRDRVLEEAGARGTALRRELGRRSSELSVRDLMGEYGDLI
TAITPCLLVSPDSVARFLPADRTHVDLVVFDEASQITVAGAVGALGRGRSAVVVGDRKQM
PPAPSASGGDLEGASQTGAESILERCLAAGVPDRALTWHYRSRDESLIAFSNKHYYGGRL
ATFPSPLTLAPGPDGGPGGHGISLRQVAGTYYPAGARGRPGILPNTNPVEARAVAKEVIR
RFELSPETTPSIGVITLNSRQRDLIEERLRESKGRVRRSVVERIRAALTQRDGLLVRSLD
NVQGEERDTILLSLTFSAKDGGNVPLNFGSLSHLGGERRLNVALTRARQQMVVFASFAPE
QLRAELSSHQGPKDLRNYLEAVRDRRAPRARPRSAGEIDRYRVELAERLREAGLEVSVGV
GHSSFEIDLVLASPAGARPGGPAGAGVAVLLDGPAWNRRECLADRDLMPADVLTAVGWSR
VERVWLPQWVADPQAVVAHLVDVAGGPAPVGRAATRTAAAVEPGSSPAEAGLAEPAGRAG
PAEPAGSAGPAGPAGPGEPAGPAGPAESAGPAGSAEPAGPAESADPAEPADPAGPARPAE
PAEPAGPAEPAGSAGPAEPAGSAGPAESAESTGPAEPIEPAEPVEPAGPAEPARVSQASG
PLAPALYESWRPEGTRSRDILDRAATDEEARREVRRVAQAICETEAPLIMRRLIVTLCRA
FNLSRTTKSREEKVRDILGDSFAHIDEHDFVWERDDFERVLRKYRRHALDHVSGIEEIHP
QELRVLMRQVRAAKPEWTSPEDLCKAALRRLSAKNRKLTPTVNAALMRALRQVEDEAQDE
GQDEDQDEAARL
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgataatcacgatctcgtcctgcgcggcctgctgcgcgtcctgcccgcgcag
ctgagggtcttcaccgagcgcgcgctcaaggccgccggccgatccgcctcccagcgcgcc
ctggccgccgcgcgtcgcgactcgcattccgttgacctcgaggatctgtcaacccagatc
aggatcctgaccgctcgtggcgaggattcccgcctcctgctcgcgctgcccccggggctg
gcctccaagctccacgaggttcgccgcctgcgcaacgacgccgtccatggccgcctcggt
gccgaccgtgcgctcgcctgcctggtcgccgtcagcgagaccctgtggatgatcggcgcc
tccgacgggccccggcaggaggtgcgagaccttatcgccgcgctggacggtggtcgtggg
ccggccctcagccctctggatgcggtggggatcggtgttcgatgcgaggccgtcctgggc
tatgcgcacgcgctggcgggcctgaccctgaccgccgtgctcgacctgagcctggccggt
gggtgggcgcccactcgcgcggatgcgcccggcccggccgatggcatggcggccatgtcc
tccccgggccggggctcgggcgcggccggggacctgggcgtggtcgagctgcgcgtgagc
gtcgtcgagcatgggggagaccgtgagatcaccgcgccccagaccctggcctgggatatc
tcccagggggatcggaggctgaccgccaacctccccctggtggccggcgagctgctccag
atcgatgaggactgcgccgccgagctgtgcgtggagatcaccgacacccagggccgtacc
caggcgcgtcatctgcagggcctggccgccctggcgccgcggcgctggcggatgagcggt
ggcagccgctgggcgggggctgcgctggcgaccttcgtccagccggaccaggcggccctg
gcccggatcgcccgaacggtgaccaaccgggtgcgccgcgacccggtccccgacgccgtg
gccggggcggtgtgcaccgaggtgcgccgcctgggcctgagggtcgacggcgacgcggcg
gcctgggccgatgccccgcggtccctgcgcacagcggctgaggtgctcgacgtcggcgtg
ggctcggccctggatatcgccctcctcatcgccgggctcctggagcggctggagatcccg
gccgccctcctgctcacggagcgcgaggtcttcgtggcctacgtccgcgacggaggcggc
atgcccgcgctggcccccggccaggtggcggggctcgtcgagcgcggcgagctcggggtg
atcaacccgctgctggcggtcaaggcgcgcaccgccatggtgcactccctggaggcgacg
aggcgccgcagggcgctggcggcgctgggcggggtcgtcctggccctcgacctgggcggg
gcccgcgcggcgggggcgcgcccgcagccgggactcgcgcgccgggaggacgatcgtgtg
gtcgagttcgacgcggtcgccccggcccaggacatcgccgatgaggcgggcccgggggcc
gatgccgccgataccgccgaggagccagagccccgcgcgcaggagcccgcctcgcccacc
ggctctccggcggctggcagcgccccgccgtcggaggtcgaggactggaagcgcagcctg
ctggacctgaccctgcgcaatccgctcatcagccgccactcgcgctccgccatcgccctg
agcctcccgccccatcttctgggcagcctggaggatctggtcaaccagcaggaccagctc
gtcctggagcgcgccgacgccggccaggccaccgccgaggacctgctggcccagcgccgg
gtgcgcaccgagctggagggcacggagcatgagcggcgcctggcctccatggacgccctg
gcccggacgaccatcgaggagaccggcgccaacaacctctacctggcgctggggaccctg
gagtgggagtcggtgggcaagcccctgcgctcaccgctgatgctcgtgcccgtcaccatc
gtccacgaggggcagaccttcgggatccgcctggatgaggccgagacctccaccccgaac
ttctccctgctggagcgcctcaaggccgatgtgggaatcgatctgggggagctgaggcag
cccgtgcgcgatagtcacggcatcgacgtcggcgcgaccctggaggccgtgactgagcgc
ctggcccaggtgctcccccgagcccgcgtggagcccaccgctcatctggggctgttccgc
ttctccacctaccgcatgtggaaggacctggaggagcactggcccgcgctcatcgccggc
ccggtggccggcctgctggggcagggcccgggccgcggggatacggccagcggggatacg
gccggcgggggcacggacggcggcccagccccgcaccccggccggggccccgcccccgag
gcgcctgaagatctggacgccctcatcgagggcctgcccctggacgcggactcgagccag
gcccgggtcgtggccgacgccgtcgcagggcgcagcctggttgtcgaggggcctccgggc
accggcaagtcccagacggtcgccaacctcatcttcgaggccgtggcccgggggcgcacc
gtcatgttcgtggcggagaaggcctcagccctggaggtcgtggcgcgccgcctgcgtgag
gaggtcgggatcggggacctcctgctcaaccttcatgacaatggcatgaggcccaagacg
gtgcgcgaggggcttcgacggtccctggaggcgggcgccgatgagcccgccgggcagagc
ggtgatccccgggcgctgcgcgaccggctggccgggctgcgcgccgacctggagggctac
cggcgcagcctgcacggcccccaggacggggcgtcctactacgaggcccatgacgcggtg
atcggcgcccagggggagaacctgcgggcggcccgtgagcggctcgccgagaccggccgc
cgcctgggcctggactccttcgacgccgctgaccacgcccgtctcctccaggagtaccgg
gccacccgggatgccctgcgcgccctggcgccccgggaggtgctcgcccgggtcacccgc
aaccgggaccgggtgctggaggaggccggggcccgaggcacggcactgcgccgcgagctc
ggccgcaggagctctgagctgagcgtgcgcgacctcatgggcgagtacggcgacctcatc
accgccatcaccccctgcctgctggtctccccggactcggtggcccgcttcctgccggcc
gaccgcacccatgtggacctggtcgtcttcgacgaggcctcccagatcaccgtggccggg
gccgtgggcgcgctggggcgggggcgctcggccgtcgtggtcggcgaccgcaagcagatg
ccgccggcgcccagcgccagtggcggggacctggagggcgcctcgcagacgggcgcggag
tcgatcctggagcggtgcctggccgccggggtgcccgatcgggcgctcacctggcactac
cgcagcagggatgagtccctcatcgccttctccaacaagcactactacggcgggcgactg
gccaccttccccagccccctgacgctggcccccgggcccgacggcggccccggcggtcat
ggcatctcgttgaggcaggtggccggcacgtactacccggcgggggcgcggggccggccg
gggatcctgccgaacacgaatccggtggaggcgcgagcggtggccaaggaggtgatccgc
cgcttcgagctcagcccggagacgacgccgtccatcggtgtcatcaccctgaactcccgc
cagcgcgacctcatcgaggagcggctgcgcgagtccaaggggcgggtgcggcgctccgtc
gtcgagcgcatccgtgcggccctcacccagcgcgacgggctgctggtgcgctccttggac
aatgttcagggggaggagcgcgacacgatcctgctgtccctgaccttctcggccaaggac
ggcgggaatgtcccgctcaacttcgggtcgctgagccatctgggaggggagcgccgcctc
aacgtggccctgactcgggcgcgccagcagatggtggtcttcgccagcttcgcccccgag
cagctgcgcgccgagctgagctcccaccaggggcccaaggacctgcgcaactacctggag
gcggtgcgtgatcgccgggcgccgcgggcgcggccccgatcggccggcgagatcgaccgg
taccgggtggagctcgccgagcgcctgcgcgaggccggcctggaggtgagcgtgggggtg
gggcactccagcttcgagatcgacctggtgctggcatcccccgcgggagcgcggccgggt
gggccggcgggtgctggcgtggcggtcctgctggacgggcccgcctggaaccggcgcgag
tgcctcgccgatcgcgacctgatgccggccgatgtgctcaccgccgtgggctggtcgcgg
gtcgagcgcgtgtggctgccccagtgggtggccgacccgcaggccgtggtggcccacctg
gtcgacgtcgccggcggccccgcgccggtcggtcgggcagcgactaggacggcggccgcg
gtggagcccggctcctccccggccgaggcagggctcgctgagcctgccgggcgtgccgga
cctgctgagcctgctgggtctgctgggcccgctggacccgctggacccggagagcccgca
gggcccgcagggcccgctgagtctgctggacccgctgggtctgccgagcccgccggacct
gctgagtccgctgatcccgccgagcccgcagaccccgctgggcctgctagacccgccgag
cccgccgagcccgccggacctgctgagcctgctgggtctgctggacctgccgagcctgct
gggtctgctggacctgctgagtccgctgagtccactgggcctgcggagcccatagagccc
gcagagccggttgaacccgccggacccgctgagcccgcccgggtgtcgcaggcctccggt
cccctggcgcctgccctctatgagtcatggcgacccgagggcacgcgctcgcgggacatc
ctggaccgcgcggccacggacgaggaggcgcgccgtgaggtcaggcgggtcgcgcaggcg
atctgcgagaccgaggcccccttgatcatgcgacgcctgatcgtcaccctctgccgcgcc
ttcaacctgtcgcgcaccactaagagccgcgaggagaaggttcgcgacatcctgggcgac
tccttcgcccatatcgatgagcacgacttcgtgtgggaaagagatgacttcgagcgggtg
ctccggaaatatcgacgtcacgccctggaccatgtgagcggcattgaggagatccatccc
caggagctgcgcgtcctgatgaggcaggtgcgcgcggccaagccggagtggacctccccg
gaggacctgtgcaaggccgccctgcggcgtctgagcgccaagaaccgcaagctgacgccc
accgtcaacgccgcgctcatgagagcgctgcggcaagtcgaggacgaggctcaggacgag
ggccaggacgaggaccaggacgaggccgcccggctctga
DBGET
integrated database retrieval system
