Actinomyces slackii: NCTC11923_01307
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Entry
NCTC11923_01307 CDS
T06783
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asla
Actinomyces slackii
Pathway
asla03420
Nucleotide excision repair
asla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11923_01307 (pcrA_1)
03430 Mismatch repair
NCTC11923_01307 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asla03400
]
NCTC11923_01307 (pcrA_1)
Enzymes [BR:
asla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11923_01307 (pcrA_1)
DNA repair and recombination proteins [BR:
asla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11923_01307 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC11923_01307 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEG74670
UniProt:
A0A3S4WK59
LinkDB
All DBs
Position
1:1557005..1559818
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AA seq
937 aa
AA seq
DB search
MNALFGALPMPGAQPAAEAALPALAAPDDAWEPTEAPPAPEDLEDLEQAPQDASAVAPTW
EERQAELAALVAGAQARAAAQAQDAVGPQGRAGSQARATGPWGVSVADPQALIEGLNPAQ
AEAVIHAGSPLLIIAGAGSGKTRVLTHRIAHLIATGRARPGEILAITFTNKAAAEMRERV
SALVGPAGERMWVSTFHSACVRILRREHEAAGLRSTFSIYDAADSTRLITLIVRELGIDP
KRFTPKVLAHRISDLKNELITPAQFAETAQTSNPLERHLAEVYPAYAARLAAANALDFDD
IIMRTVQLLQARPAVAEMYRRRFRHILVDEYQDTNHAQYVLVRELVGPGASGAASPLTPG
ELTVVGDSDQSIYAFRGATIRNIEEFEKDYPSARTILLEQNYRSTQNILAAANAVIARNT
GRRAKNLWTDSGDGAPVVGYVADSEHDEARWISQEIDRLSDEHGLRPADVAVFYRTNAQS
RALEEVFIRSGQPYKVVGGTRFYERREIKDAIAYLRAVDNPDDDVNLRRILNVPKRGLGD
KAEAALAEHASRHAISFGLAIADAAGALREGAGEAGAAGARGAAEPSEPPAVEGLTTRAR
NQVRGFHELLTSLRHMLAAGDGVADILDAALDSSGYLAELRASDDPQDATRVENLAELHS
VATDFQGANPDGSLADFLERVSLVADSDQLPDAPEQDQGQITLMTVHTAKGLEFPAVFVT
GMEDGTFPHMRALAEDSELAEERRLAYVALTRARERLYLTRAAVRSAWGAANAMPASRFL
DDIPEQTMEWKRLASSSELLRGSTGWGSGWGEGGFSGRSSRAGRSTRTEDDDFAPPVGAG
TRTGRLGRVESAKDRAAKRVEARRARAGKPEQAPADLPACVAGIRVGDQVRHDSYGLGTV
VGLEGAGRSTTARVEFVIDGVTVTKRLILRYAPVAKV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccctcttcggggccctgcccatgcctggcgcccagcccgccgccgaggccgcc
ctgcccgcactggccgcccccgacgacgcctgggagcccaccgaggccccgcctgccccc
gaggacctcgaggacctcgaacaggccccccaggatgcctcggccgtggcccccacctgg
gaggagcgccaggccgagctggccgccctcgtcgccggagctcaggcccgggccgccgcc
caggctcaggacgccgtcggccctcaggggcgcgccggctcccaggcgagggccacgggg
ccctggggcgtgagcgtcgccgacccccaggccctcatcgagggcctcaaccccgctcag
gccgaggccgtcatccacgccggctcccccctgctcatcatcgccggcgccggctcgggc
aagacccgcgtgctcacccaccgcatcgcccatctcatcgccaccggtcgcgcacgcccc
ggggagatcctggccatcaccttcaccaacaaggcggccgcagagatgcgcgagcgggta
tcggctctggtgggcccggccggggagcgcatgtgggtctccaccttccactccgcctgc
gtgcgcatcctgcgccgtgagcatgaggccgcggggctgcgctcgaccttctccatctac
gacgccgccgactccacccgcctcatcaccctcatcgtgcgcgagctggggatcgacccc
aagcgcttcacccccaaggtcctggcccaccgcatctcggacctgaagaacgagctcatc
acgccggcgcagttcgccgagaccgcccagacctccaaccccctggagcgccacctcgcg
gaggtctaccccgcctacgccgcccgcctggccgccgccaacgccctggacttcgacgac
atcatcatgcgcaccgtccagctcctccaggcccggcccgcggtggccgagatgtaccgg
cgccgcttccgccacatcctggtcgacgagtaccaggacaccaaccacgcccagtacgtg
ctcgtgcgcgagctggtcggccccggcgcctcaggggccgcctcgcccctgacgcctggg
gagctgacggtggtgggcgactccgaccagtccatctacgccttccgcggtgccaccatc
cgcaacatcgaggagttcgagaaggactacccctcggcccggaccatcctgctggagcag
aactaccgctccacccagaacatcctggccgccgccaacgccgtcatcgcccgcaacacg
gggcgccgagccaagaacctgtggaccgactccggcgacggcgccccggtggtgggctac
gtggccgactccgagcacgacgaggcccgatggatcagccaggagatcgaccgcctgtcc
gatgagcacgggctgcggcccgcggatgtggccgtcttctaccgcaccaacgcccagtcc
cgggccctggaggaggtcttcatccgctccggtcagccctacaaggtggtcggcggcacc
cgcttctacgagcggcgcgagatcaaggacgccatcgcctacctgcgcgccgtggacaac
ccggatgacgatgtcaacctgcgccgcatcctcaacgtccccaagcgcggcctgggggac
aaggccgaggccgccctggcggagcacgcctcgcgccacgccatctccttcggcctggcc
atcgccgacgccgccggcgccctgcgcgagggggccggcgaggccggggcggccggggca
aggggggccgccgagccgagcgagcccccggccgtcgaggggctgaccaccagggcgcgc
aaccaggtgcgcggcttccacgagctgctgacctcactgcggcacatgctcgctgcgggt
gacggcgtggccgacatcctcgatgccgccctggactcctcgggctacctggccgagctg
cgcgcctccgatgacccccaggacgccacccgcgtggagaacctcgccgagctccactcc
gtggccaccgacttccagggcgccaaccccgatggatccctggccgacttcctggaacgg
gtctccctggtggccgactccgatcagctgcccgacgcccccgagcaggatcaggggcag
atcaccctcatgaccgtccacaccgccaagggcctggagttccccgccgtcttcgtcacc
ggcatggaggacggcaccttcccgcatatgcgggccctggccgaggactccgagctggcc
gaggagcgtcgtctggcctacgtggccctgacccgtgcccgcgagcgcctctacctcacc
cgcgcagcggtgcgcagcgcctggggggcggccaatgcgatgccggcctcccgcttcctc
gacgacatccccgagcagaccatggagtggaagcgcctggcctcctccagtgagctcctg
cgcggctccacgggctggggcagcggctggggtgagggcggattctcagggcgctcatcg
cgagccgggcggtcgacccgcaccgaggatgatgacttcgccccgccggtgggcgcgggg
actcgcacgggtcggctcgggcgcgtcgagagcgccaaggaccgggcggccaagcgggtc
gaggcgcgcagggcccgcgccgggaagcccgagcaggctccggccgatcttcccgcctgc
gtggccgggatccgagtcggcgaccaggtgcgccacgactcctacggcctgggcacggtc
gttggtctggagggggccgggcgctcgaccacggcgcgcgtggagttcgtcatcgacggg
gtcaccgtcaccaagcgcctcatcctgcgctacgccccggtcgccaaggtgtga
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