Actinomyces slackii: NCTC11923_01398
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Entry
NCTC11923_01398 CDS
T06783
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asla
Actinomyces slackii
Pathway
asla03420
Nucleotide excision repair
asla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11923_01398 (pcrA_2)
03430 Mismatch repair
NCTC11923_01398 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asla03400
]
NCTC11923_01398 (pcrA_2)
Enzymes [BR:
asla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11923_01398 (pcrA_2)
DNA repair and recombination proteins [BR:
asla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11923_01398 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC11923_01398 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF4081
Motif
Other DBs
NCBI-ProteinID:
VEG74759
UniProt:
A0A3S4SPG9
LinkDB
All DBs
Position
1:1682973..1686458
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AA seq
1161 aa
AA seq
DB search
MSAPTAPAPDPQHTGPGASARIIAGQAGRGPVASDGLTPVELARVLGLHAPTSEQARVIA
HPLSPLLVVAGAGSGKTATMSQRVVHLVATGAVRPDQVLGLTFTRKATAELAQRVSTRLA
QLAASGLTDLSPDAPEPTIATYNSFAGTIVREHGLRIGVDPEATLITEARAWQIASGLIE
ARTEPLPVDSLGQATQAVLRLDGALSENLLSVEDAAAGLSDLADLFESLASIRGCKSMVG
KAPQTMSQWHGLLEAAVDYREHKRRHGLLDFGDQIALACRIAEGSQEVREHLRAQYPAVL
LDEFQDTSVAQVRLLSALFAGSGVTAVGDPHQAIYGWRGASAGALDAFHARFNPGAGGPG
APVLPLSTAWRNDTAILQAANAVSAPLRNHQPEPGDAVVEHIPVEPLQPRPAQTGLARGL
VAGAYLQDPLQEAETIAAFLAERWSPQAQMAVLCRARGLFEPIAAALERSGLPVSIVGLG
GMLTVPEVADLRALITVAADPERGDRLMRLLTGAGIAPTDLAALHDIARGLSRSPGAGAA
EADAPQLCEALEAIVRAEDARQAQAPAEPDQADQVGRSGWSNRHGSAAGEEPALSPMGRT
IALRLGAVLRRVRAGLHLPLPELLGLAEQALGLDIDLAARTDQSMGRRALDAFHATAQQY
ADEIEAPTLAGFLRWLDTAQERENGMEAPEVEPEPGAVQLLTIHASKGLEWDTVAVAGMT
EGVFPSYRPTPKPDLTVSTTGWMTSRDEFPHPLRADAQTLPPFELGELEPGSAGQDDKDT
VKEMWGRYALALGRHGLAEERRLAYVAITRARHDVLLTGSHLAREASKAKPASRFLQELR
RRDLVTPWGQGWVEHEEGALNPMTTQVRTGWWPEPLDSADAGAPAAEAERHALRRARDQA
ARAVAEAGRRAHEMVGPAPGAAGGDPVVQRWWTEAALLLAERQDQESQAPGVRIPTHLAA
TRLDDLRSDPAAFALDLRRPLPPEPRTAGRLGTVFHEAIAQRLAGRAALIPLSDAGVPDS
LAPADRRRVEQWLTTAESLPLLEGHALHATEVERELTVGGTTLRCRIDAVFQAPGGGWLI
VDWKTGRGRVPVDQLSVYVHAWAASQGVPTGQVRAAYAYVDRGEVEELAPADLLPLEAVA
QLLAPGAADVPAQVVTGSSRD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccccaccgctccagcgcctgatccgcagcacacgggtcctggcgcctcggct
cgcatcatcgctgggcaggcgggccgaggccccgtggcctcggacggcctgacgccggtg
gagctcgcccgagtcctgggccttcatgcccccacttcggagcaggcccgcgtgatcgcc
caccccttgagccccctgctcgtcgtcgccggcgcgggctcgggcaagaccgccaccatg
agtcagagggtcgtccacctcgtggccaccggtgccgtgcgccccgaccaggtcctgggc
ctgaccttcacccgcaaggccaccgccgagctcgcccagcgggtctccacgcgcctggcc
cagctcgccgcatcgggcctgaccgacctgtccccggatgctcccgagcccaccatcgcc
acctacaactccttcgccggcaccatcgtgcgcgagcacgggctgcgcatcggcgtggac
ccggaggccaccctcatcaccgaggcccgtgcctggcagatcgcctccggcctcatcgag
gcccgcaccgagcccctgcccgtggacagcctcggccaggccactcaggcggtgctgcgc
ctggatggggccctgtccgagaacctgctcagcgtcgaggacgccgccgccggtctcagc
gatctggccgatctcttcgagtccctggcctccatccgcggctgcaagtccatggtgggc
aaggccccccagaccatgagccagtggcacgggctgctggaggccgccgtcgactaccgt
gagcacaagcgccgccacgggctgctggatttcggcgaccagatcgccctggcctgccgc
atcgccgagggcagtcaggaggtgcgcgagcacctgcgcgcccagtaccccgcggtcctg
ctcgatgagttccaggacacctccgtggctcaggtccgcctcctgtcggcgctgttcgcc
ggctcaggggtgaccgccgtcggcgacccccaccaggccatctacgggtggcgcggggcc
agcgctggagcgttggacgccttccacgcgcggttcaaccccggggccggtggccccggc
gcaccggtgctgccgctgtccaccgcctggcgcaacgacaccgcgatcctccaggccgcc
aacgccgtctccgcgcccctgcgcaaccaccagcccgagcccggcgacgccgtcgtcgag
cacatccccgttgagcccctccagccccggccggcgcagaccggcctggcccgggggctc
gtggccggggcctaccttcaggacccccttcaggaggcggagaccatcgccgccttcctc
gccgagcgctggagccctcaggcccagatggccgtcctgtgccgggcgcgcggcctcttc
gagcccatcgccgcggccctggagcgcagcgggctgccggtgagcatcgtgggactgggc
ggcatgctcaccgtccccgaggtggccgacctgcgcgccctcatcacggtggccgcggac
cccgagcgcggggaccgcctcatgcgcctgctcaccggtgcgggcatcgcccccaccgat
ctggccgccctgcatgacatcgcccgcggtctgagccgcagccccggagccggcgctgcg
gaggccgatgcgccccagctctgcgaggccctggaggccatcgtcagggccgaggacgcc
cggcaggcccaggcgcccgctgagccggaccaagcagaccaggtcggtcggagcggctgg
agcaacagacacgggagcgcggcgggcgaggagccggcactcagccccatgggcaggacc
atcgccctgcgcctgggcgccgtgctgcgccgagtgcgcgccggcctgcacctgccgctg
cccgagctcctgggcctggccgagcaggccctggggctggacatcgacctcgccgcccgg
accgaccagtccatggggcggcgcgccctggacgccttccacgccaccgcccagcagtac
gccgatgaaatcgaggccccgaccctggcgggcttcctcaggtggctggacaccgcccag
gagcgggagaacgggatggaggcccccgaggtcgagcccgagcccggcgccgtccagctc
ctgaccatccacgcctccaaggggctggagtgggacaccgtggccgtggccggcatgacc
gagggcgtcttcccctcctaccgccccacccccaagccggacctgacggtgtccaccacc
ggctggatgacctcccgggacgagttcccccaccccctgcgagctgacgcccagaccctg
ccgcccttcgagctgggcgagctggagccgggcagcgccggccaggatgacaaggacacg
gtcaaggagatgtgggggcgctacgccctggccctggggcgccacggcctggccgaggag
cgccgcctggcctacgtggccatcacccgtgcccgccacgacgtgctgctgaccggctcc
cacctggccagggaggcctccaaggccaagcccgcctcccggttcctccaggagctgcgg
cgccgcgacctggtcaccccctgggggcagggctgggtggagcacgaggagggcgcgctc
aacccgatgaccacacaggtgcgcaccggttggtggcccgagcctctggacagcgccgat
gccggcgcccctgccgccgaggcagagcgccacgcgctgaggcgggcgcgtgaccaggcc
gcccgtgccgttgccgaggccggccggcgggcccatgagatggtggggccggcgccgggc
gccgcgggcggcgatcctgtggtgcagcgctggtggaccgaggccgccctgctcctggcc
gagaggcaggaccaggagtctcaggcgcccggcgtgcgcatccccacccacctcgcggcc
acgaggctcgatgacctgcgcagcgatccggcggccttcgccctggacctgcgccggccc
ctgccccccgagccgcgcaccgccggacgcctgggcaccgtgttccacgaggccatcgcc
cagcgcctggccgggcgggccgccctgatcccgctcagtgacgcgggcgtgcccgactcg
cttgcccccgcggacaggcggcgcgtggagcagtggctgaccacagcggagagccttccc
ctgctggagggccatgccctgcacgccacggaggtggagcgcgagctcaccgtggggggc
acaaccctgcgctgccggatcgacgccgtcttccaggcccccggcgggggctggctcatc
gtcgactggaagaccggccgcgggcgcgtccccgtggaccaactcagcgtctacgtccac
gcctgggccgccagccagggcgtgcccaccgggcaggtgcgcgccgcctacgcctatgtg
gaccgcggggaggtcgaggagctcgcccccgccgaccttctgcccctggaggccgtggcc
cagctcctggcgccaggtgcggccgatgtgccggcgcaggtggtgacagggagttcacgc
gactaa
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