Actinomyces slackii: NCTC11923_02193
Help
Entry
NCTC11923_02193 CDS
T06783
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asla
Actinomyces slackii
Pathway
asla03030
DNA replication
asla03430
Mismatch repair
asla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11923_02193 (dnaE_2)
03430 Mismatch repair
NCTC11923_02193 (dnaE_2)
03440 Homologous recombination
NCTC11923_02193 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asla03032
]
NCTC11923_02193 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
asla03400
]
NCTC11923_02193 (dnaE_2)
Enzymes [BR:
asla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11923_02193 (dnaE_2)
DNA replication proteins [BR:
asla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11923_02193 (dnaE_2)
DNA repair and recombination proteins [BR:
asla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11923_02193 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF655
Motif
Other DBs
NCBI-ProteinID:
VEG75522
UniProt:
A0A3S4TDN0
LinkDB
All DBs
Position
1:complement(2651146..2654742)
Genome browser
AA seq
1198 aa
AA seq
DB search
MADTSEQDSSGARDDFVHLHVHTDYSMLDGAGKIKDYVAEAKRLGQPALAITDHGYMFGA
YEFYAAAKAAGIKPIIGVEAYMTPGTSRHDKTRVFWGDESQRSDDVSARGSYTHMTLLSR
NDEGLHNLMRMDSLASLEGQWGKAPRMDRELLGRYSAGLIGTTGCPSSEIQTRLRLGQWE
EALRCAGELQDIFGKDFFYVELMDHGLEIERRVTKDLLRLAEQIGAPLLATNDSHYVRPE
DREVQDAMLCINSGSVLSDPDRFRFDGDTYYLRPGDEMRRLFAEMPGACDNTLLVAEQCD
VRFRTVDEGASFMPVFPVPEGETMESWFVKECWAGMDRRFGGSIPEDCRAQAEYEISVIV
QMGFPGYFLVVADYINWAKSQGIRVGPGRGSGPGSMVAYAMGITELNPLNHGLIFERFLN
PERISMPDIDVDFDERRREEVIEYVRDKYGADRTSQVVTYGVIKAKQSLKDSSRVLGYPY
AVGDRLTKAMPPTIMGKDITIKGMFDPEDKRYGEAEEFRKLHAEDADAQRIVELAKGLEG
MTRQWGVHACAVIMSSDPLVDIIPMMQRLQDGAVITQFDYPTCEHLGLLKMDFLGLRNLT
VISDALDNIVANGKPELDIDHIELDDAPTYQMLARGETLGVFQLDGGGMRTLLRLMKPDN
FEDISAVSALYRPGPMGADSHTNYALRKNGMQEIVPIHPELQEALEPILGTTHGLIVYQE
QVMKIAQELAGFSMGSADKLRKAMGKKKPEILAKEYVGFRKGMIDNGFSEESIKALWDVV
VPFSAYAFNKAHSAAYGVVSYWTAYLKCHYPTEYMAAVLTSMGDNKDKMAIYLGECRRMG
ITVLPPDVNTSAGRFSAVGEDIRFGMAAVRNVGINVVEAIIAAREEKGAFTSFEDFLDKV
PAVVCNKRTIDSLIKAGAFDSLGYSRRALQACHEDFVDEVIGVKRNEAAGQFDLFASLMD
ASGPGAQEDPFSSGPVFSSEVPGLPEWDKKDKLAYERDMLGLYISDHPLMGLESLLGKLA
DREISELHEDDEIPDGAMVTIAGLITSLTRKTTKQGNLWAIAQVEDLAGSVEVLFFPQTY
QTVSTMLAPDTVVSVRGRLNRRDGQTALYAQELTLPDISTATNEAVSITLPTNRCTGPLV
ERFKDVLVRHPGSSTVRLTLTSPGREIRTQLAAGLRVQASPAFYSDIKALLGPGCLRH
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcggataccagcgagcaggactccagcggcgcgcgcgacgacttcgtccatctccac
gtgcacaccgactactcgatgctcgatggcgcgggcaagatcaaggactacgtcgccgag
gccaagcgcctgggccagccggccctggcgatcaccgaccacggctacatgttcggcgcc
tacgagttctacgccgcggccaaggccgccgggatcaagcccatcatcggggtcgaggcc
tacatgacccccggcacctcccgccacgacaagacccgcgtgttctggggggatgagtcc
cagcgctccgacgacgtctcggcgcgcggctcctacacccacatgacgctgctgtcccgc
aacgacgaggggctgcacaatctcatgcgcatggactccctggcctccctggaggggcag
tggggcaaggccccccgcatggaccgcgagctgctgggcaggtacagcgccggtctcatc
ggcaccacgggctgcccctcctcggagatccagacgcgcctgcgcctgggccagtgggag
gaggcgctgcggtgcgccggggagctgcaggacatcttcggcaaggacttcttctacgtc
gagctcatggaccacggcctggagatcgagcgccgggtcaccaaggacctgctgcgcctg
gccgagcagatcggcgcgccgctgctggccaccaatgactcgcactacgtgcggcccgag
gaccgcgaggtccaggacgccatgctgtgcatcaactccggctcggtcctgtccgacccg
gatcgcttccgcttcgacggcgacacctactacctgcgccccggcgatgagatgcgccgg
ctcttcgccgagatgccgggggcatgcgacaacaccctgctcgtggccgagcagtgcgat
gtccggttcaggaccgtcgacgagggcgcctccttcatgcccgtcttccccgttcccgag
ggcgagaccatggagtcctggttcgtcaaggagtgctgggccggcatggaccgccgcttc
ggcggctccattcccgaggactgccgggcgcaggccgagtacgagatcagcgtcatcgtc
cagatgggcttccccggctacttcctggtggtggccgactacatcaactgggccaagtcc
caggggatccgagtggggcccggcagaggctcggggccgggatccatggtggcctacgcc
atgggcatcaccgagctcaacccgctgaaccacgggctgatcttcgagcgcttcctcaac
cccgagcgcatctccatgcccgatatcgacgtcgacttcgacgagcgcaggcgcgaggag
gtcatcgagtacgtccgtgacaagtacggggcggaccgcaccagccaggtggtgacctac
ggggtcatcaaggccaagcagtccctgaaggactccagccgagtgctgggctacccctat
gcggtgggggaccgcctgaccaaggccatgcccccgaccatcatgggcaaggacatcacc
atcaagggaatgttcgaccccgaggacaagcgctacggcgaggctgaggagttccgcaag
ctccacgccgaggacgccgacgcccagcgcatcgtcgagctggccaaggggctggagggc
atgacgcgccagtggggagtccacgcctgcgccgtcatcatgtcctccgacccgctggtg
gacattatccccatgatgcagcgcctccaggacggcgctgtcatcacccagttcgattac
cccacctgcgagcacctgggcctgctcaagatggacttcctggggctgcgcaacctcacg
gtcatctccgatgccctggacaacatcgtggccaacggcaagcccgagctggacatcgac
catatcgagctcgacgacgcccccacctaccagatgctcgcccgcggggagaccctgggc
gtcttccagctcgacggcgggggcatgcgcaccctgctgcgcctgatgaagcccgacaac
ttcgaggacatctccgcggtctccgccctctaccgccccgggcccatgggcgcggactcg
cacaccaactacgccctgcgcaagaacggcatgcaggagatcgtccccatccaccccgag
ctccaggaggccctcgagccgattctgggcacgacccacggcctcatcgtctaccaggag
caggtgatgaagatcgcccaggagctcgccggcttctccatgggcagcgccgacaagctc
cgcaaggccatgggcaagaagaagcccgagatcctggccaaggagtacgtcggcttccgc
aagggcatgatcgacaacggcttctccgaggagtcgatcaaggcgctgtgggacgtggtg
gtccccttctccgcctacgccttcaacaaggcccactccgcggcctacggcgtcgtctcc
tactggacggcctacctcaagtgccactacccgaccgagtacatggccgcggtcctgacc
tccatgggggacaacaaggacaagatggccatctacctgggggagtgccgccgcatgggc
atcaccgtgctccccccggatgtcaacacctccgcgggccgcttctccgccgtcggggag
gacatccgcttcggcatggcggcggtgcgcaatgtgggcatcaacgtcgtcgaggccatc
atcgccgcccgggaggagaagggggccttcaccagcttcgaggacttcctggacaaggtg
ccggcggtggtgtgcaacaagcgcaccatcgactccctcatcaaggccggggccttcgac
tccctgggctactcgcgccgcgccctgcaggcctgccatgaggacttcgtcgatgaggtc
atcggggtcaagcgcaatgaggccgccgggcagttcgacctgttcgcctccctcatggac
gcctcgggcccgggcgcccaggaggatcccttctcctcgggcccggtcttctcctcggag
gtgccgggccttcccgaatgggacaagaaggacaagctggcctacgagcgcgacatgctg
ggcctctacatctccgatcacccgctcatggggctggagtccctgctgggcaagctcgcc
gaccgtgagatctccgagctccacgaggatgatgagatccccgacggcgccatggtcacc
atcgccgggctcatcacctccctgacgcgcaagaccaccaagcagggcaacctgtgggcg
atcgcccaggtggaggatctggccgggagcgtcgaggtcctcttcttcccccagacctat
cagaccgtctcgaccatgctggcccccgataccgtggtctcggttcgcgggcgcctcaac
cgccgcgacgggcagaccgccctgtacgcccaggagctgacgctgccggacatctcgacg
gccaccaacgaggcggtgtccatcaccctgcccaccaaccgctgcaccggtcccctggtg
gagcgcttcaaggacgtcctggtgcgccatcccggcagctcaacggttcgcctgaccctg
accagcccgggccgcgagatccgcacccagctcgccgccggcctgcgggtccaggccagc
ccggccttctactccgacatcaaggcgctcctgggcccaggatgcctgcggcactga
DBGET
integrated database retrieval system
