Actinomyces slackii: NCTC11923_02236
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Entry
NCTC11923_02236 CDS
T06783
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asla
Actinomyces slackii
Pathway
asla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11923_02236 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asla03019
]
NCTC11923_02236 (pnp)
03016 Transfer RNA biogenesis [BR:
asla03016
]
NCTC11923_02236 (pnp)
Enzymes [BR:
asla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC11923_02236 (pnp)
Messenger RNA biogenesis [BR:
asla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC11923_02236 (pnp)
Transfer RNA biogenesis [BR:
asla03016
]
Prokaryotic type
tRNA degradation factors
NCTC11923_02236 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
PCB_OB
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
VEG75564
UniProt:
A0A3S4SGL1
LinkDB
All DBs
Position
1:complement(2702708..2705065)
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AA seq
785 aa
AA seq
DB search
MFIDDPEVTAAEAVIDNGSFGKRVVRFETGRLAKQAAGSAMAYLDGETAILSATTVGKHP
KDQFDFFPLTVDVEERQYAAGRIPGSFFRREGRAGTAAILACRLIDRPLRPSFVKGLRNE
VQVVETVLAIHPDDDYDVLAINAASMSTQIAGLPFSGPVAGTRIALIDGQWVAFPRHSEQ
RRATFQMVVAGRVLDSGDVAIMMVEAGATEGAWDLIAAGAVAPTEAVVAEGLEAAKPHIK
ALCQAQMEVAASASKPTAEFPLYLDYSDEQYDAVEKAAADKGLAAAIATEGKQERDLAVD
AVREEVLASLAEAFPAEEDDKALKAAFRSVTKQLVRRRTLTEGVRMDGRGLKDIRTLAAE
VEVLPRVHGSAIFERGETQILGVTTLNMLRMEQQVDDLSPVTHKRYMHNYNFPPFSTGET
GRVGAPKRREIGHGNLAERALVPVLPSREDFPYAIRQVSEALGSNGSTSMGSVCASTLSL
LNAGVPLRAPVAGIAMGLMHDEIDGETRWATLTDILGSEDAFGDMDFKVAGTRDFITALQ
LDTKLDGLPSEVLAGALGQARDARLFILDVLAQAIDAPDEMAPTAPRVLTVRIPVDKIGE
VIGPKGKMINQIQEDTGADLTVEDDGTVYIGASDGPSAEAARDAVNAIANPQMPEIGECF
VGTVVKTTTFGAFVALSPGKDGLLHISQIRRLVGGKRVENVEDVLAVGDKVQVELAEIDQ
RGKLSLHAVLSEEQLAAEAEGETARKAARFSERGERRERGEAEGERRERRPRRRRLRTAE
EERED
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttcattgatgaccccgaggtcaccgccgcagaggcagtgatcgacaacggctccttc
ggcaagcgcgtggtgcgcttcgagacgggccgtctggccaagcaggccgctggaagcgcc
atggcctacctcgatggcgagaccgccatcctgtccgccaccactgtgggcaagcacccc
aaggaccagttcgacttcttcccgctgaccgttgacgtcgaggagcgccagtacgccgcc
gggcgcattcccggctccttcttccgccgcgagggtcgcgcgggaaccgcggccatcctc
gcctgccgcctcatcgaccgcccgctgcgcccctccttcgtcaagggcctgcgcaatgag
gtccaggtcgttgagacggttctggccatccaccccgatgacgactacgacgtgctggcc
atcaacgcggcctccatgtccacccagatcgccggactgcccttctccgggccggtggcc
ggcacccgcatcgccttgatcgacgggcagtgggtcgccttcccccgccactccgagcag
cgccgcgccaccttccagatggtggtggccggtcgcgtcctggactccggggacgtggcc
atcatgatggtcgaggccggggccaccgagggcgcctgggatctcatcgccgccggcgcc
gtggcccccaccgaggccgtggtcgccgagggcctggaggccgccaagccccacatcaag
gcgctgtgccaggctcagatggaggtggccgcctccgcctccaagcccaccgcggagttc
cccctctacctggactactccgatgagcagtacgacgccgtggagaaggcggccgcggac
aagggcctggccgccgccatcgccaccgagggcaagcaggagcgcgacctggccgtggac
gcggtgcgcgaggaggtcctggcctcgctggccgaggccttccccgccgaggaggacgac
aaggccctcaaggccgccttccgctcggtgaccaagcagctggtgcgccgtcgcaccctg
accgagggcgtgcgcatggacgggcgcgggctcaaggacatccgcaccctggccgccgag
gtcgaggtcctgccccgtgtgcacggctcggccatcttcgagcgcggcgagacccagatc
ctgggcgtgaccaccctgaacatgctgcgcatggagcagcaggtcgacgacctgtcgccg
gtcacgcacaagcgctacatgcacaactacaacttcccgcccttctccaccggtgagacc
ggacgagtgggcgcccccaagcgccgggagatcgggcacggcaacctggccgagcgtgcc
ctggtgcccgtccttcccagccgggaggacttcccctacgccatccgccaggtctccgag
gccctgggctccaacggctcgacctccatgggctcggtgtgcgcctcgaccctgtccctg
ctcaacgcgggagtgcccctgcgcgcccctgtggcgggcatcgccatgggcctcatgcac
gatgagatcgacggcgagacgaggtgggccacgctgacggacatcctgggctccgaggac
gccttcggcgacatggacttcaaggtggccggaacccgtgacttcatcacggccctgcag
ctggacaccaagctcgacggcctgccctccgaggtcctggccggcgcgctgggccaggcg
cgtgacgcccgtctgttcatcctcgacgtcctggcgcaggccatcgatgcccctgatgag
atggctcccaccgcgccgcgcgtgctgacggtccgcatcccggtggacaagatcggcgag
gtcatcggccccaagggcaagatgatcaaccagatccaggaggacaccggcgcggacctg
accgtggaggacgacggcaccgtctacatcggcgcctccgacggcccctcggccgaggcc
gcccgcgacgccgtcaacgccatcgccaacccgcagatgcccgagatcggcgagtgcttc
gtgggcaccgtggtcaagaccacgaccttcggcgccttcgtggccctgtccccgggcaag
gacggtctgctccacatctcccagatccgccggctggtcggcggcaagcgggtggagaac
gtcgaggacgtcctggccgtgggggacaaggtccaggtcgagctcgccgagatcgaccag
cggggcaagctctcgctgcacgcggtcctgtccgaggagcagctcgccgccgaggccgag
ggcgagaccgcccgcaaggccgcccgcttctccgagcgcggcgagcgccgtgagcgcggc
gaggccgagggcgagcgccgtgagcgccgtccgcgtcgtcgccgcctgcgcacggctgag
gaggagcgcgaggactga
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