Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_0013
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Entry
MOUSESFB_0013 CDS
T01857
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asm03019
]
MOUSESFB_0013 (yhaM)
Messenger RNA biogenesis [BR:
asm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOUSESFB_0013 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BAK79155
LinkDB
All DBs
Position
21024..21992
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AA seq
322 aa
AA seq
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MKGHINIKDFKVGERIQGVYLIRTIHVKLTNSSNKKYLDINFSDKTGNINAKLWDLKDDY
NDEFKENTLVKVKGCILSWQGSMQLKIENLSNDFDKEYINIDDYVQCAPMDSNYMFDELY
NLISGFKQKEIRSVLLAILDIKKDKLLYYPAAKSNHHSIKGGLLYHILSMIKLGESICGL
YPFVNRELLFAGIVLHDIEKTEEMDSNELGIVSTYTVEGQMLSHLIQGITLVDRVCNSLN
ISSEVRMLLQHMILSHHYEAEYGSPIKPMIIEGELLHHIDVIDARMYDMKKIIDNINEGD
LSDRVFSLNSRRIYKPKKLLEE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcatataaatataaaggattttaaagtaggagaaagaattcaaggagtatat
cttattagaactatacatgtaaaacttacaaactctagtaataaaaaatatttagatatt
aatttttctgataaaactggtaatataaatgctaagctttgggatttaaaagatgattat
aatgatgaatttaaagaaaatactttagttaaagtaaaaggatgtattttgagttggcaa
ggtagtatgcaacttaagattgaaaatttatcaaatgattttgataaagaatatataaat
attgatgattatgttcaatgtgctcctatggattctaattatatgtttgatgagctttat
aatttaatatctggatttaaacaaaaggagataagaagtgttttattagctatactcgat
ataaaaaaggataaacttttatattatccagcagctaaaagtaaccatcattcaataaaa
ggaggattattatatcatattttaagtatgataaagcttggtgagagcatatgtggactt
tatccttttgttaatagagaattactatttgcgggaatagtgcttcatgatattgagaaa
actgaagaaatggattcaaatgaattaggtatagtaagtacatatacagtggaaggtcaa
atgctttcacatttaatacaaggtataactcttgttgatagggtttgcaatagtttaaac
atatctagtgaagttaggatgttacttcagcatatgatattgtctcatcattatgaggct
gaatatggaagtccaataaagccaatgataattgaaggggaacttcttcatcatatagat
gttatagatgcaagaatgtatgatatgaaaaagattatagataatataaatgagggagat
ttgtcagatagagtattctctttaaatagcaggagaatatataaacctaagaaattatta
gaggagtag
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