Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_0032
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Entry
MOUSESFB_0032 CDS
T01857
Symbol
dnaX
Name
(GenBank) putative DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Pathway
asm03030
DNA replication
asm03430
Mismatch repair
asm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOUSESFB_0032 (dnaX)
03430 Mismatch repair
MOUSESFB_0032 (dnaX)
03440 Homologous recombination
MOUSESFB_0032 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asm03032
]
MOUSESFB_0032 (dnaX)
03400 DNA repair and recombination proteins [BR:
asm03400
]
MOUSESFB_0032 (dnaX)
Enzymes [BR:
asm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOUSESFB_0032 (dnaX)
DNA replication proteins [BR:
asm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOUSESFB_0032 (dnaX)
DNA repair and recombination proteins [BR:
asm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOUSESFB_0032 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
TIP49
DNA_pol3_gamma3
RuvB_N
AAA_14
AAA_18
AAA_30
AAA_5
RCF1-5-like_lid
Phage_Gp15
AAA_19
TmcA_N
AAA_assoc_2
TsaE
AAA_lid_RFC1
Motif
Other DBs
NCBI-ProteinID:
BAK79174
LinkDB
All DBs
Position
40479..41960
Genome browser
AA seq
493 aa
AA seq
DB search
MDNNSLYIKYRPVKFKDICGQENVSSILKNQVKSHKFSHAYLFSGIRGTGKTTCARIFAK
AINCINNVNGEPCYECRSCNSTYEILNIVELDAASNNSVDQIRTLVEELRYSNFVDGYKV
YILDEVHMLSISAFNALLKSLEEPPSNVVFILSTTEIKKIPKTIISRCQKFEFKNIDNKN
IIDRLKYIVESENISIDFESISLISKLADGSMRDAISILERVMLSADNITFEHSRRILGI
TSSEMIFDIIDNLRLNKLNKILLIISKIFEDSLNIKSFINDFRNVLRDIMFLKINKENLN
ILIEKNSLNIKNIMAISEILDFDYIYMVLSELNKINDMGNLSDIEYRVYLEMLIVRIVYD
GGESLLNKSGFDLQSEVKKSDFNDTANKNIKFDKWNDFLKYLKMNKHMVLYSLLTNGDLK
DMSSDSIVFKCNTEGILNRLKKRDTLREIKTNLFDFFGGSIEFELFFSNEVEEDNIQHKL
KGYFGDEIEIQNK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggataataattctttatacattaagtatagacctgttaagtttaaagatatatgcggt
caggaaaatgtgtctagtatattgaagaatcaagtcaaatcgcataaattttctcatgca
tatttgttttctggaataagaggtactggtaagactacttgtgcaagaatttttgcgaaa
gctataaattgtataaataacgttaatggtgagccgtgttatgaatgtagatcttgtaat
tctacatatgaaattcttaatatagttgagctagatgctgcatctaataatagtgtagat
cagattagaacactagttgaagaattaagatattcaaattttgtagatggatataaagtt
tatattttagatgaggttcatatgctctcaataagcgcttttaatgcgttacttaagagt
ttagaagagcccccatcaaatgttgtttttattttatcgacaactgaaataaaaaagata
cctaaaacgattatatctagatgtcagaaatttgagtttaagaatatagataataaaaac
ataatagatagactaaaatacatagttgaaagtgaaaatataagtattgatttcgagtca
atttcattaatatctaaattagctgatgggtctatgagggatgctataagtattttggag
agagtgatgttgtcagctgataatattacatttgagcattctcgtaggattttaggtatt
acatctagtgagatgatattcgatattatagataatttaagattaaataagttaaataag
attcttttaataatatcaaaaatatttgaagatagtcttaatattaaaagttttattaat
gatttcagaaatgtattgagagatattatgtttttaaaaataaacaaggaaaatttaaac
atattaattgaaaaaaatagtttaaatataaagaatattatggctatatcagaaattttg
gattttgattacatatatatggttttaagtgaattaaataaaataaatgacatgggaaat
ttaagtgatattgagtatagagtttatttagagatgcttatagtaagaatcgtatatgat
ggtggagaatctttgttaaacaaatcaggttttgatttgcagagcgaagtaaaaaaatct
gattttaatgatactgcaaataaaaatattaaatttgataaatggaatgattttttaaag
tatctcaagatgaataaacatatggttctatattctcttttgactaatggagatttgaag
gatatgagtagtgatagtattgtttttaagtgcaatacagagggaatattaaatagattg
aaaaagagagatacacttagggaaattaaaacaaatttgtttgatttttttggaggtagt
atagaatttgagttatttttctcaaatgaagttgaggaagacaatattcaacataagtta
aaaggttattttggtgatgagatagaaatacaaaacaagtag
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