Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_0082
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Entry
MOUSESFB_0082 CDS
T01857
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Pathway
asm03030
DNA replication
asm03430
Mismatch repair
asm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOUSESFB_0082 (dnaE)
03430 Mismatch repair
MOUSESFB_0082 (dnaE)
03440 Homologous recombination
MOUSESFB_0082 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asm03032
]
MOUSESFB_0082 (dnaE)
03400 DNA repair and recombination proteins [BR:
asm03400
]
MOUSESFB_0082 (dnaE)
Enzymes [BR:
asm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOUSESFB_0082 (dnaE)
DNA replication proteins [BR:
asm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOUSESFB_0082 (dnaE)
DNA repair and recombination proteins [BR:
asm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOUSESFB_0082 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
HROB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
BAK79224
LinkDB
All DBs
Position
103673..107212
Genome browser
AA seq
1179 aa
AA seq
DB search
MNDFVHLHVHSEFSLLDSSCKIRNLVERAKELGMTSLAITDHGVMYGCLEFYKACKMYGI
KPIIGCEIYVANKSMDIKNADKDNFTSHLVLLVKDEIGYRNLLKIVSDSFIRGFYYKPRV
DIEYLKEHSEGLIALSACLSGGISKYILRNDIDGAKNLSIIYKEIFKEDFYLEIQDHGIE
DQKKVNNLLLEFSSELDIKLVVTNDVHYIKKDDANAHDVLICIQTGSNVDEERRMKYHGD
QFYLKSKDEMYEAFPNYMDGLLNTIEIRDKCNFEYKFHENMPPKYIMDNSLEPFEYLKRL
CYLGLINKYDEFSHEIEIFKIEDILDDSKFEILKEEIGKNITDTKKKLVDRVKYELNLIN
SMGFVDYFLIVWDFIKFCMEKSIPTGPGRGSVAGSIVAYVLNITKVDPIKYSLIFERFLN
PERISMPDIDSDFCNERREEVISYVRDKYGDQNVSNIITFGTMAAKACIRDVGRAMNYPY
GEVDKIAKMVPNMLNITIDLALLYNKELNDLYNNDLRVKKLIDISKRLEGLPRHTSIHAA
GVIISPYNLTDLIPVKKDGDMLVTQFPMANLEELGLLKMDFLGLRTLTVINDCIKIIEKN
KGIKIDLDNIDFDDQNVFNMIGDGKTCGVFQLESFGMTSFMKELKPNSIEDIIAGISLYR
PGPMDEIPNYIKNKNNIGDIKYLTKELEDILNVTYGVIVYQEQVMEIVQKLSGYSLGRSD
LVRRAMAKKKHEEMEKERKKFVYGYKDGEEIIKGCVNNGIDEKIAHKIFDQMVDFASYAF
NKSHAAAYAIIAYETAYLMRYYKSEYICALLNSVINNMDKVCYYIRFGESMNIKIFPPCV
NNSHNKFIVEGEYIYFGLSAIKNLGEGACEKIVYYREKYGKFKNEYDFFKACVKCSINKK
GIESIIKSGALDVFNISRSYLLMNFEKIVDGISKEFRENLEGQMNLFGLIGREDDKTFKL
NNRDDLYDDSDKNLLFEKEVLGIYISGHPIHKYKEILDKVCTNSISDFYDDDMKINDGYE
VVIGGSVREFKKIITKNNSMMCFLYVEDKYSSIECVVFPKVYEKFNYLINDNSIVIIKGV
FKKNDDVFKIIVNEIIGIEEYDRFKLYILCKSLKEITNSFNKAKDILISNRGHVNVNLYS
LEGKKVFRVNDYGVNLSNSLICELNKVFSQEFVKVIITK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattttgttcatttacatgtacactcagagtttagtttgttagattcttcatgt
aagattagaaatttagttgaacgggcgaaagaacttggtatgacatctcttgctataaca
gatcatggtgttatgtacggatgtttggaattttataaagcatgtaaaatgtatggcatt
aaacctataattggttgtgagatctatgttgcgaataaatctatggatataaagaatgca
gacaaggataatttcactagtcatttagttcttcttgtgaaagatgagattggatataga
aatttattaaaaatagttagtgactcttttatccgaggattttattataaaccgagggtt
gatatagaatatttgaaagaacattcagagggtcttattgcacttagtgcttgtttgagt
ggtggaatttctaaatatattttaagaaatgatatagatggtgcgaaaaatttatcaatt
atatataaagaaatatttaaggaagatttttatttagaaattcaagatcatgggatagag
gaccaaaaaaaggttaataatttgcttttggaattttcatcagagcttgatataaaactc
gttgttacaaatgatgttcattacataaaaaaagatgatgcaaatgcccatgatgtgctt
atttgcatacaaacaggtagcaatgtagatgaagaaagaagaatgaaataccatggtgat
cagttttatttgaaatcaaaagatgagatgtatgaagcgtttcctaattatatggatgga
cttttaaataccattgaaatacgagataaatgcaattttgagtataaatttcatgagaat
atgcctccaaaatatattatggataattcacttgagccttttgagtatttaaagaggcta
tgttatcttgggctcataaataaatatgatgaattttcacatgagattgaaatatttaaa
attgaagatattttagatgactctaagtttgaaatattaaaagaagagataggtaaaaat
attacagatactaagaaaaaattagtagatagggttaaatatgaacttaatttgataaat
tctatgggatttgttgattattttttaattgtgtgggattttataaaattttgcatggaa
aagtcgataccaacaggacctggaagaggaagtgttgctggatctatcgttgcatatgtg
cttaatataacaaaagttgatcctataaagtatagtttaatatttgagaggtttttaaat
cctgaaagaatttctatgccagatatagattccgatttttgtaatgagagaagagaggaa
gtcattagctacgtaagagataagtatggtgatcagaatgtgtctaatattataactttt
ggtacaatggctgcaaaagcttgtattagagatgttggaagagctatgaattacccatat
ggtgaggttgataaaatagctaagatggttcccaatatgttaaatataactatagattta
gcgcttctttataataaagaattaaatgatttatataataatgatcttagagttaagaag
ttgattgatatatcaaagaggcttgaaggtcttcctagacatacatctattcatgctgca
ggtgttattatcagtccttataatttaacggatttaatacccgtaaaaaaagatggcgat
atgcttgtaactcaatttcctatggcaaatcttgaagagcttggactgcttaagatggat
ttcttaggtcttagaactttaactgtgataaacgattgcattaagattattgagaaaaat
aaagggattaaaatagatttagacaatattgattttgatgaccaaaatgtatttaatatg
attggagatggcaaaacttgtggagtatttcagctcgaatcatttggaatgactagtttt
atgaaggaattaaaacctaattctattgaagatataatagcaggcattagtttatataga
ccagggcctatggatgagataccaaattacataaaaaataaaaataatattggagatata
aaatatttaacaaaagaacttgaagatatattaaatgttacatatggagttattgtttat
caggaacaagtaatggagatcgttcagaagttatctggatattctttgggaaggagcgat
cttgtacgacgtgctatggccaaaaaaaagcatgaggagatggaaaaggagaggaagaaa
tttgtttatggatataaagatggagaagaaataataaaaggatgcgtaaataatgggatt
gatgaaaaaattgctcataaaatctttgatcagatggtagattttgcctcttatgccttt
aataagagtcatgctgctgcatatgcgattattgcttatgaaactgcatatttaatgagg
tattataaatctgaatatatatgtgcacttttaaatagcgttataaataatatggataag
gtttgctattatataagatttggagaaagtatgaatataaagatttttcctccatgtgta
aataatagtcacaataagtttatagttgagggtgaatatatatattttggattgtcagct
attaaaaatttaggagaaggtgcatgtgaaaaaatcgtttattatagagaaaaatatgga
aagttcaagaatgagtatgatttttttaaggcttgtgtaaaatgttcaatcaataagaaa
ggcatagagagtattataaaatcaggagcattagatgtttttaatatttctaggtcatac
cttctcatgaattttgagaagattgttgatggaatatctaaagaatttcgagaaaattta
gaaggtcaaatgaatttatttggattaattggcagggaagatgataaaacatttaaatta
aataatcgtgatgatttgtatgatgatagtgataagaatcttttatttgaaaaagaggtt
ttaggcatatatatttctggacatcctatacacaagtacaaagaaatattagataaagtt
tgtacaaattctatttctgatttttatgatgatgatatgaaaattaatgatggatatgag
gttgtaataggtggatcagtgagagaatttaagaaaattataactaaaaataattctatg
atgtgctttttatatgttgaagataagtattcttcaatagagtgcgttgttttccctaag
gtatatgaaaaatttaattatttaataaatgataatagtattgttataataaaaggtgtg
tttaaaaaaaatgatgatgtatttaaaattatagtaaatgagataataggaattgaagaa
tatgataggtttaagttgtatattttatgtaaaagcttgaaagagataacaaattctttt
aataaggctaaggatattttaattagtaataggggacatgttaatgttaatttgtattcc
ttggagggaaagaaggtttttagagtgaatgattatggtgttaatttaagtaatagtctt
atttgtgagctgaacaaagtattttcacaggaatttgtaaaggtaattattactaaataa
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