Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_0412
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Entry
MOUSESFB_0412 CDS
T01857
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Pathway
asm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOUSESFB_0412 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asm03019
]
MOUSESFB_0412 (groL)
03110 Chaperones and folding catalysts [BR:
asm03110
]
MOUSESFB_0412 (groL)
03029 Mitochondrial biogenesis [BR:
asm03029
]
MOUSESFB_0412 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asm04147
]
MOUSESFB_0412 (groL)
Enzymes [BR:
asm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MOUSESFB_0412 (groL)
Messenger RNA biogenesis [BR:
asm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MOUSESFB_0412 (groL)
Chaperones and folding catalysts [BR:
asm03110
]
Heat shock proteins
HSP60 / Chaperonin
MOUSESFB_0412 (groL)
Mitochondrial biogenesis [BR:
asm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MOUSESFB_0412 (groL)
Exosome [BR:
asm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MOUSESFB_0412 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MOUSESFB_0412 (groL)
Exosomal proteins of breast cancer cells
MOUSESFB_0412 (groL)
Exosomal proteins of colorectal cancer cells
MOUSESFB_0412 (groL)
Exosomal proteins of bladder cancer cells
MOUSESFB_0412 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAK79554
LinkDB
All DBs
Position
469369..470994
Genome browser
AA seq
541 aa
AA seq
DB search
MAKTILFSAEARRSMQNGVDILADTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTSGANPILIRNGIK
LAVDAAVEEIKKLSKNVNGKQDISRVASISAGDSTVGELIADAMEKVGNEGVITVEESKN
METSLEVVEGMQFERGYVSPYMVTDAEKMEASLEDPYILITDKKISNIQEILPILEQIVQ
QGKKLLIIAEDIEGEALATLVVNRLRGTFTCVGVKAPGFGDRRKEMLKDIAILTGAQVIS
EELGYDIKETTVDMLGRAESVKITKENTTIVDGKGSKEEIANRVSQIKRQIEDTTSEFDK
EKLQERLAKLSGGVAVVKVGAATETELKEKKLRIEDALAATKAAVEEGIVSGGGTAYVHV
LRKICGLSSEVHDEQVGINIILRSLEEPIRQIAFNAGVEGSVIIDKVKQSEEGIGYDALN
GKYINMVENGIVDPAKVTRTALQNAASVAATFLTTEAAVVEIPEKDKQVPQAPGMGMDGM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacgattttatttagtgctgaagctagaagatctatgcaaaatggtgtagat
atattggctgatactgtgaaagttacacttggaccaaaaggtagaaatgttgttttagat
aaaaaatttggttcgccactaattacaaatgatggtgttacaatagcaagagaaattgaa
cttgaagatccgtttgaaaatatgggtgctcaacttgttaaagaagttgcgactaaaact
aatgatgttgctggagatggaacgactactgcgactgttttagcacaagctataataaga
gagggtcttaaaaacgttacgtcaggtgctaatccaatacttataagaaatggtataaaa
ctagctgtagatgcagcagttgaggagattaaaaaactttctaaaaatgtaaatggtaag
caagatatatctagggttgcatctatatctgcaggtgattcaactgttggagagcttata
gctgatgctatggaaaaagtaggtaatgaaggcgttataacagttgaagagtctaaaaat
atggaaactagtcttgaagttgttgaaggtatgcagtttgaaagaggttatgtaagtcca
tatatggttactgatgcggaaaaaatggaggcatctttggaggatccatatattttaata
acagataagaaaatttctaatattcaagagatacttcctattcttgagcagattgtgcaa
caaggtaaaaaactattgataatagctgaagatatagaaggtgaagctttggctactttg
gttgttaatagattaagaggaacatttacatgtgttggtgttaaagctccaggatttggt
gatagaagaaaagagatgcttaaagatattgctatattaactggtgcacaagttatatct
gaagaattagggtatgatataaaagaaacaacagttgatatgttaggaagagcagagagt
gttaagataactaaagagaatactacaattgttgatggtaagggaagtaaggaagagata
gctaatagagtttctcaaattaaaagacaaattgaggatacaacttcagaatttgataaa
gagaagcttcaagagagacttgccaaactttcaggtggagttgctgtagttaaagttgga
gcggctactgaaactgaacttaaagagaaaaaattaaggatagaggatgctctagcagct
actaaagcagctgtagaagaaggaattgtttcaggtggtggaacagcatatgttcatgta
cttagaaaaatatgtggcttatcttctgaagtgcatgatgagcaagtaggaataaatata
attttaagatctttagaggagccaattaggcagattgcatttaatgctggagttgaaggg
tctgtaataattgataaagttaagcaaagtgaagaaggaattggatatgatgccttaaat
ggtaagtatataaatatggttgagaatggaatagttgacccagctaaagttacaagaaca
gctcttcaaaatgcagcatcagttgcagctacatttttgacaacagaagctgccgttgta
gagatacctgagaaagataaacaagtgccacaagctccaggaatgggaatggatggtatg
tattaa
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