Alligator sinensis (Chinese alligator): 102367830
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Entry
102367830 CDS
T02922
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asn04121
]
102367830 (TRIM56)
Enzymes [BR:
asn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102367830 (TRIM56)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102367830 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
ANCHR-like_BBOX
PML_CC
YtxH
dCache_2
Motif
Other DBs
NCBI-GeneID:
102367830
NCBI-ProteinID:
XP_006015869
UniProt:
A0A1U7R1S8
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAQASASLQDLIREDFLTCKICYELYTVPKILPCLHSYCQRCLEPLLKDGALHCPECRLK
ADAPGGAPTTKTNFFINSLLELFQLKHKRDLACTVCSDAQRTQPATARCLDCKDFLCQTC
TQGHCCSRLTLHHKVVKLEQFLAGEHDAEMRLLQELCCQDHQQEALRFFCDTCGAPICRD
CRMLDHFEHKVVSMASAVQRERPSVEQLIESLGGTIVGISEREKTVGVAMDTLEAAGENI
KETITKYVEDLSAYLHAQKDAALGELSAFLTQQMERYQQVKEELQNQRDKAISTREFSQR
ILDVGKDYEILHLEGMIRNRIQELQAYTPRELKSQVPKLTISWDEPTQLSKAALFSLAFP
RQQPEGDVDTFEAGSERSVSLREGFDESSLDSEEDYCLSSDERLLSTPEASLSPCRWRGL
QPVCVCTFEVEQYPSYSKPSISGIAVLPHKDGYLLLDQANEEIRQYSIKGFLQKSIPLPD
HDRGFCGISVCGDTLACSSDTYLFFLTLDGKFLRKLRLRGSESSYALTSYKDSYVAVSEG
TLCSISLYSPSGHCVGRVKPPDYEDGKFLFVAVNAWEEFIVSDFVKKQVLILKKSGQILN
VLKAPHSPLSKPFSVCVDALGNIFVVDQFQVIQFSRDGRRGEEILSSQRQRKRPRVITVD
LDGCLVLVREDCHVHVFWP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcctccgcatcgctgcaggatttaatccgggaggatttcctgacctgtaag
atctgctacgagctgtacacggtgccgaagatcctgccgtgcctccatagctactgccag
cgatgcctggagccgctgctgaaggatggagccctgcactgccccgagtgccggctgaag
gcggacgcccctggcggggcccccactacgaaaaccaacttcttcatcaacagccttctg
gagctattccaactcaagcacaagcgcgacctggcctgcaccgtctgctctgacgcccag
aggacccagcctgccactgcccgctgcctggactgcaaagacttcttgtgccagacctgc
acgcagggccactgctgctcccgcctcaccctgcaccacaaggtggtgaagctggagcag
ttcttggctggggagcacgatgccgagatgaggcttctgcaggagctgtgctgccaggac
caccagcaggaagcgctgcggttcttctgcgacacctgcggcgctcccatctgcagggac
tgccgcatgctggaccactttgagcacaaggtggtgtccatggccagcgccgtgcagcgg
gagcggccttctgtggagcagctgatcgagagcctggggggaaccattgttggcatctct
gagcgggagaagactgtgggggtggcgatggacacgctggaagctgcaggtgagaacatc
aaggagacgatcaccaagtatgtggaagacctcagtgcctacctccacgcccagaaggat
gctgcgctgggcgagctgtcagctttcctgacccagcagatggagaggtatcagcaggtg
aaggaggagctgcagaaccagagagacaaagccatcagcacgagggagttctcccagagg
atcctggatgtggggaaggactacgagatcctccatttggagggcatgataaggaacagg
atccaggagctccaggcatacaccccgcgggagctaaagagccaagtccctaaactgacc
atttcctgggacgagcctacacagctctcaaaagcagcgctcttcagcctggcttttccc
aggcagcagccggaaggagacgtggacacttttgaggctggcagcgagaggtctgtgtca
ctcagggaggggtttgatgagtcatcccttgactcggaggaggactattgtctgagctct
gacgagaggttgctttccacccctgaggcgagcctttccccatgcagatggcgtgggctg
cagcctgtgtgtgtctgtacctttgaggtagaacaatacccctcttattcaaagcccagc
atctcggggattgcagtcctgccgcacaaggacggctatctcctcctggaccaggcgaac
gaagagataaggcagtacagcattaaagggtttctccagaagtcgatacctctgccggat
catgacaggggcttctgcggtatttcagtctgtggagacaccttggcctgctcctcagac
acgtacctcttcttcttgacactggatggcaagttcctgcgcaagctgcggctaagggga
agtgagtcctcctatgctctcacatcctacaaggactcctatgttgctgtcagcgagggg
acgctctgctccatctccctgtacagcccctccgggcactgcgtgggcagagtgaaacct
ccggattacgaggatgggaagttcttgtttgttgctgtcaatgcctgggaggaattcatc
gtctcagactttgtcaagaagcaggttctcatcctcaagaagtcagggcagatcctcaat
gtgctgaaggcaccgcactcaccactttcgaagccattcagtgtctgtgtggacgccctc
ggcaatatttttgtggttgatcagttccaggtgattcaattctcaagagacggcaggaga
ggggaggaaatactgagcagccagaggcaacggaagaggccccgggtcatcaccgtggat
ctggatgggtgcctcgtcctggtgcgggaagactgccacgtccacgttttttggccttag
DBGET
integrated database retrieval system
