Alligator sinensis (Chinese alligator): 102368273
Help
Entry
102368273 CDS
T02922
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102368273 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asn03041
]
102368273 (DHX8)
Enzymes [BR:
asn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102368273 (DHX8)
Spliceosome [BR:
asn03041
]
Complex C
Other components
Step II factors
102368273 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
nSTAND_NTPase5
PhoH
TsaE
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102368273
NCBI-ProteinID:
XP_014374161
UniProt:
A0A1U8D1H1
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MLDEDDVKVAADALKELEALMPNADVREKQRNSDHRAKRRRRSRSRSRDRDRKRRHRSRS
RSHSRTRDKNKGKSRYRSRSRSPSPSRDRKDREDYSVKSKDRWRDKHVDRPPPEEPSIGD
IYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSF
TGSKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTL
ERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEP
PFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLN
THWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLP
IFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSV
AKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDE
AHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEI
LYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPE
LIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYN
SKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLA
STVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLE
PMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLL
AVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKA
ICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVT
TIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgaggatgatgtgaaagtggcagctgatgctcttaaagaacttgaagcttta
atgcctaatgctgatgtgcgggaaaaacaaaggaatagtgaccacagggcaaagaggagg
aggagaagtcgcagtcgcagcagggatagggacaggaagcggagacaccgatcacgttcc
aggtcgcattctaggactcgggataagaataaagggaaatctaggtatcgctcacggagc
aggagcccaagtcccagcagggaccgtaaggaccgagaggactattctgtgaagagcaaa
gatagatggagagacaagcatgtggatcgacctccacctgaagagccttccattggagat
atttacaatggcaaagtcacgagcataatgcagtttgggtgctttgtgcagttggaagga
ctaaggaaacgctgggaaggcttggtccatatttctgagcttcgcagagagggacgtgtt
gctaatgttgctgatgttgtgagcaaagggcaaagagtaaaggtcaaagttttgtccttt
accgggtccaaaaccagcctgagtatgaaggatgttgatcaagatactggggaagactta
aatccaaaccgacgcagaaacctggttggagagaccaatgaagagacttccatgaggaac
ccagacagacccagtcacctctccttggtgaatgcccctgaagtggaagatgataccctt
gaaaggaagcgcctcacccggatttcagaccctgaaaaatgggaaatcaaacagatgatt
gctgctaatgtgctatccaaagaagagtttcctgactttgatgaggagactgggattctc
cctaaagttgatgatgaggaagatgaggaccttgagattgagctggttgaggaagagcca
ccattcttgcgaggacataccaaacaaagtatggatatgagtcccatcaaaatagtgaag
aatcctgatggctccttgtcccaagctgcaatgatgcagagtgcattagccaaagaaagg
cgagaacttaaacaagcccaaagggaagcggagatggactctatccccatgggactcaac
actcactgggtggatcctcttcctgatgtggatgggagacaaatagctgccaacatgcgg
ggtattgggatgatgcccaacgatatcccagagtggaagaaacatgcatttggtggcaac
aaagcttcgtacggtaaaaagacccaactttccataattgagcagagagagagcctccca
atctttagacttaaggagcagctaattcaggcagttcatgacaaccagatcctgattgtt
atcggagagacaggctctgggaaaacaacacagatcactcagtatctggctgaggcaggg
tatacgtcaaggggaaaaattggatgtacccagcctcgcagagtggctgcgatgtctgtt
gccaagagagtgtcagaagaatttggttgctgtttgggacaagaggttggctacacaatt
cgatttgaagactgcaccagccctgagacagtcatcaaatacatgacagatggtatgtta
ctgcgggaatgtctcattgatcctgacctaacccagtatgccatcatcatgctagatgag
gcccatgagaggactatacacactgatgtgctctttgggctgctgaaaaagacagtgcag
aaacggcaagatatgaaacttattgtaacgtcagcaacattagatgctgtgaaattctct
cagtatttctatgaagctccaatcttcacgattcctggcagaacgtatccagtggaaatt
ctgtacacaaaagaaccagagacagattatttggatgccagtctgatcacagtcatgcag
atccatttaacagagcctccaggtgacatcctggtgttccttactggtcaggaagagatt
gacactgcatgtgagatcctctatgagagaatgaagtcactaggacctgatgtgccagag
ttaattatcctgccagtatattcagctttacccagtgagatgcaaaccagaatctttgac
ccagctcctccaggcagtcggaaggttgtcattgctaccaacattgctgagacctctctg
actattgatggaatctattatgtggtggatcctgggtttgtgaaacagaaagtttataat
tcgaagactgggattgatcagctggttgttacaccaatttcccaggcccaagcaaagcaa
cgagcaggaagagctgggagaacagggccaggaaaatgttacagactttacacagagcgt
gcttatcgagatgaaatgttgaccaccaacgtgcctgaaatccagagaactaacttggcc
agtacagtgctctctcttaaggctatggggatcaatgatctgctctcctttgactttatg
gatgctcccccaatggaaaccttaatcaccgccatggaacaactatataccttgggagct
ctggacgatgagggactactcactcgacttgggcgcagaatggcagagtttcctttggag
ccaatgttgtgcaagatgttgatcatgtctgtacatttgggctgcagtgaggaaatgtta
actatagtctctatgctatctgtacagaatgtgttctacagaccaaaggacaaacaagcg
cttgctgatcagaagaaagcgaagtttcatcagacagaaggtgaccatctcactctgctg
gctgtttacaactcttggaagaataataagttttcgaacccctggtgctatgagaatttt
atccaggctcggtctttgcgtagggcacaagatatccgtaaacaaatgctggggatcatg
gacagacacaagctggatgtggtatcctgtggaaaggcaacagttcgagtccagaaggca
atctgtagtggtttcttccgaaacgcagcaaagaaggatccccaggaaggctaccggact
ctcattgaccagcaggtggtctatattcacccatctagtgctctcttcaaccgacagccg
gaatgggtggtgtatcatgaactggtgctgaccacaaaagaatatatgcgtgaagtgacc
accattgacccacgctggctggtggaatttgcaccagctttcttcaaggtctctgatccc
actaagctgagcaaacagaagaagcagcagcggctggagcccttgtacaatcgttacgag
gagcccaatgcatggaggatctcgcgtgcattcaggcgtcgatga
DBGET
integrated database retrieval system
