KEGG   Alligator sinensis (Chinese alligator): 102368629
Entry
102368629         CDS       T02922                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:asn03009]
    102368629 (RRP9)
Ribosome biogenesis [BR:asn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    102368629 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Beta-prop_Vps41 WDR54 Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_WDR19_1st WD40_RFWD3
Other DBs
NCBI-GeneID: 102368629
NCBI-ProteinID: XP_025066207
UniProt: A0A3Q0H3E0
LinkDB
Position
Unknown
AA seq 467 aa
HRADPALGPQLPGAEERPRQKVAAAKLNEEISSDSDVESPALSGKRKRDNEAEEEIEETA
QEKKLRLAKLYLEQLRQQEEEKAEEEAFKEELVAGRLKEDVLEQKGKLQRLIAKDLQPPD
PAEIRVLRGHQLPITCLVISPDDKYIFSAAKDCSIIKWDVESGKKEHMIRGGKKGTEGHV
GHTAHILCMAISSDGKYLATGDRNKLIMIWEAATCKHLYTFTGHRDAVSGLSFRKGTHQL
YSASHDRSVKVWNVAENAYVETLFGHQDVITGLDSLSRECCVTSGGRDGTIRVWKIPEES
QLVFYGHQGSIDCVQLINEEHMVSGADDGSVALWGLSKKKPLATVRQAHSNHGAQGLEQP
YWISSVAAMLNSDVVATGASRCSCSASVRLWKCNEGFRKLELLFDIPLVGFVNSLKFSNA
GDFLVAGIGQEHRLGRWWRIKEAKNSICIIPLKRMAAASSVQTGEGS
NT seq 1404 nt   +upstreamnt  +downstreamnt
caccgcgctgaccccgcgctcggtccgcagctccccggcgcggaggagaggccccggcag
aaggtcgccgctgccaagctcaacgaggagatctccagcgactcggacgtcgagagccct
gcgttatctgggaagcggaagagggacaatgaggcggaagaggagatcgaggagacagct
caggaaaagaagctgagattagccaaactgtacctggaacagcttcgtcagcaggaggag
gaaaaggctgaagaggaggctttcaaagaggaattggtggctggccgcctgaaagaagat
gtgctcgaacaaaagggaaaactgcagcgactgatcgccaaagatctgcagcctccagat
ccagcagaaatcagggtgctacgagggcaccagctgcccatcacctgcctggtcatcagt
ccagatgataagtacatcttctcagcggccaaagactgctccatcatcaaatgggatgtg
gaaagcgggaagaaggagcacatgatccgtggagggaagaagggcacagaagggcatgtt
ggccacacagcacacattctctgcatggctatctcctcggatggcaaatacctggccaca
ggagacaggaacaaactgatcatgatctgggaggctgcaacctgcaagcacctgtataca
ttcaccgggcatcgagatgctgtatcgggcctgtcgtttcggaaaggcacgcaccagctg
tacagtgcctcacacgatcgctccgtcaaagtctggaacgtggcagagaacgcctacgtg
gagacactgtttggacaccaggatgtcatcacaggactggacagcctgagtcgggaatgc
tgcgtcacatcaggtgggagagatggcaccatccgggtctggaagattcctgaagagtct
cagcttgtgttctacgggcaccagggctccattgactgcgtccagctgatcaatgaggag
cacatggtatctggtgcagatgatgggtctgttgccctttggggtctttcaaaaaagaaa
ccactagcaactgtgaggcaagcacacagtaaccatggtgcccagggactggagcagccc
tattggatctcctcagtggctgccatgctgaacagtgacgttgtagctacaggtgcctcg
cgctgctcatgcagcgccagcgtgaggctgtggaagtgcaacgagggattccgcaagctg
gagctgctcttcgacatccccctggtgggctttgtcaacagcttgaagttctcaaatgca
ggggacttcctggtggctggaatcgggcaggagcacaggttgggccgctggtggcgaatc
aaagaagccaagaacagcatctgtatcatccccctgaagaggatggcagcagctagcagt
gtgcagacgggtgaaggctcctaa

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