Alligator sinensis (Chinese alligator): 102368952
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Entry
102368952 CDS
T02922
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asn03037
]
102368952 (NPHP4)
Cilium and associated proteins [BR:
asn03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102368952 (NPHP4)
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
102368952
NCBI-ProteinID:
XP_025062196
UniProt:
A0A3Q0GR00
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Position
Unknown
AA seq
1431 aa
AA seq
DB search
MSEWERVFVQNLTVPPHSQRRRQIRRESTAFQCVLKYIEGTLIKQRALEGLAGVEYQLRM
TLFDITYRHFFGRTWKSSTRPLKAIPGQPPRASFNETVYFHTSLNHPGIIIIVEVVATAR
KQDGTHQDLSCGFGIMRLFNAKSEPTDVAVKGKGLKLYHGTPRALLHPLLQDPIEKNKYM
TVMENSHLQCTLKLHPPLEAVYHLFPENLLMSGLQRIPGLLPAQGDTNDLFWKPQLMKSV
TWYLDKLCIHLYPSLEKFEEELLDSLNNNHLLKDNSMLSGNLVAIQERRLHIGVHNGLCF
VQTPQVAVLVPEAEAIRGRSDKKQGSSAKFSAMGQALVLRSRIHLTEMVRHPAFGIFFQL
EYVFCVPGGADSKALSTTSLNKAAYMHSIRWAVWNPLLDSDSSKVILPLHGSTLHNPAHV
LVYKTPPTSMSSEEVKQVESGTIQFCVSTNSEEHLGASPNTLSHVREELFCSKKPSTPSL
RSTPSPQIMASTQASTQGPGLSISQLSVSPHHVTNPPLQRPSGSLLPPSPGRGRRRRAQE
QVHGSGSITHLEADLSCGSLVQESPASDQLQELPFMPVHVPIIAMGAQASSSSTVLTRAS
LARLHAAGFPEILDCNKEPAEVLDPAAPVNFDPQREEADFLQSNEIVLQFLAFSRTPQAG
TEVTWPKTVYFTFQFYRFSQVTTPRLQLVKMDLADSTSSAPSSHILVPINKEGMLDSGTP
GLQLKYLVDPAFLKAGEQRWFLRYLADHTLQIDIWDGDSLLLIGSAAVRLKHLLRQGRTA
VQVHHELEVISTEYEQDTTVMSGDVLRHGSVKPIGVHAVVKGRLHLCLANVGHLCEQRLK
QLNSLPPPRSRIVSSHDGTSGFHGGSLFSFSACGAKNVSQAQKLADVDSELAAMLFSRLR
EVSIAFQHTTREASAIRRRKLERMVLVRQLESQEDLSRRQAALMGQHEQRIQHSRDLQII
DAYRERIKAESISNMLNQAITTKYVLYATLGTAEFFEFALKNPYSVQHTVTIEIDHPELS
VIVDTREWRHFKELTKTVTPIEEDMFHLHDNVRPQVYLRPKETVHIPFKYQTFLIDPVVM
MQGPPEVKFSKDTDATTPWTSNAMLTKHIKVSFTVNGGKPLTILSVTVEPQPHVVDHTFR
FYHPEMTFFKKSLRLPPWHTIPGAPAGVPGGEPEMYVRCSDPNIVCETKKMGPGEPQDVF
LKVAGGPSPQIKTFFVAFYTDAWLATPLQIWQFYLHSLQRVDVSCVTGQLTRLSLVLRGT
QAIRKVKAYTSHMQELKVDPEGIFILPPHGVQDLHIGVRPQKTGNKFIYLNLVDVEYHQL
VSSWLVCVSCRQPLISKAFEITLPAGGGKGSNKRITYTNPYPSRRMYFLHTNRPDLLQFK
EDSFELRGGEVYTIGLRFAPTQNTGEEEILIYINDHEDKNEETFCVKVVYQ
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatgggaaagggtttttgtgcagaatctgactgtccctccgcactcgcaaagg
agacggcagatccggagggaatcaacagcatttcagtgtgtcctgaagtacatcgaggga
actttgattaagcagagagcactggaaggcttagctggagttgaataccagctccgcatg
accctctttgacatcacatatcgccatttctttgggagaacctggaaaagcagcaccagg
cccctgaaggctatcccaggacagccacccagagccagtttcaatgagacagtgtatttt
cacacatccttaaaccaccctggcatcatcatcattgtggaagtggtggccacagcaaga
aagcaagatgggacccatcaggatctctcctgtgggtttggaatcatgcgcctgttcaac
gccaagtctgagccaacagatgtggctgtgaagggcaaagggctcaagctgtaccatggg
acaccacgagcattgctacacccactcctccaggaccctatagaaaagaacaaatacatg
actgtgatggagaacagtcaccttcagtgtaccctaaagctacacccacccttggaagct
gtatatcaccttttccctgagaacctgctgatgtctggactgcagagaattcctgggttg
ctgccagcacaaggagacacaaatgatcttttttggaaaccccagctcatgaaatcagtg
acatggtacttggataaactgtgcatccatctctacccttcgttagaaaagtttgaggaa
gagctactggattcactcaacaacaatcacttacttaaggataactccatgctcagtggg
aacctggttgccattcaggagcgccggctgcacatcggggtccacaatggcctctgcttt
gttcagacacctcaggtagcagtgctggtgccagaggctgaggcgattcgggggcgctct
gacaagaaacaaggctccagtgctaaattcagtgccatgggccaggctctggttttgaga
agccgcattcatttgactgagatggttcgtcacccagcatttggaatcttcttccagctc
gagtatgtgttctgtgtgccaggtggagcagacagcaaggcactatccactacctctttg
aataaagcagcctacatgcattcaattcgatgggctgtttggaaccctctgctggactcg
gattcctcaaaagtgattttaccactgcatggaagcaccctgcacaaccctgcccacgtg
ttggtttacaagacccctccaaccagcatgagctctgaagaggtgaagcaggttgagtct
ggtaccatccagttctgtgtttccactaactcagaggaacatctcggtgcttccccaaat
actttaagtcatgtcagagaagagcttttctgctccaagaagccatccacaccatctctc
cgttctacaccttcaccccagataatggcttccactcaagcttccactcagggacctggg
ttgtcgatctctcagttgtccgtgtcaccacaccatgtaacaaaccccccgttgcagcgg
cccagtggctctctacttcctccatctccagggagaggccgacgtcgacgcgcacaggag
caggtgcatggcagtggcagcataactcatctggaggctgacctcagctgtggctcgctg
gtccaagagtccccggcgagtgaccagctgcaggagttgcccttcatgccagtgcatgtg
ccaatcattgctatgggagcccaggcaagcagctctagcacagtgctcactcgggcctct
ctagcccgcctacatgctgctggctttccagaaatcctggattgcaacaaggaaccagca
gaagttttggaccctgcagcccctgtgaattttgacccccaaagggaagaagctgacttc
ttgcaaagcaatgaaatagttctacagttccttgcctttagcaggactccccaggctggc
acagaggtgacatggccaaagactgtgtatttcaccttccagttctaccgcttctcacag
gtcaccacaccacggctgcagctggtcaaaatggacctcgctgactccacctcttcagcc
ccatcttcccacatcttagttccgattaacaaggagggaatgcttgacagtggcactcca
gggctgcagctaaagtatctggtagatcctgctttcctgaaggctggagaacaacgctgg
tttctgcgttacctagctgaccataccctacagattgacatctgggatggagactctttg
ctgctcattggatctgcggcagttaggttgaagcacctgctccgccagggtcggacagca
gttcaagtgcatcatgagttggaggtcatttcgactgaatatgagcaggacaccacagtg
atgagcggggacgttctccggcatggctcagtgaagcccattggagtccatgctgtggtg
aaaggtcgacttcatctgtgcttggctaatgttggtcacctgtgtgagcagagactgaag
caactgaactctttgccaccaccccgttctcgcatcgtctcttcacatgatggaaccagt
ggctttcacggaggcagcttgttctccttcagcgcttgtggggctaagaatgtctcccag
gcacagaagctggcagatgtggacagtgagctggctgccatgctattcagtcgcctgcgt
gaggtcagcattgccttccaacataccacccgtgaggccagtgccatacgcaggcggaag
ttggagaggatggtgctggtgagacagctcgaatcccaggaggacctcagcaggagacaa
gcagccctcatgggtcagcatgaacagcgcattcagcactccagggacctgcaaattatt
gatgcctaccgggagcgcatcaaggccgagagcatctccaacatgctgaatcaggccatc
accaccaaatacgtgctctatgctaccctggggacagcagagttctttgagtttgcactg
aaaaacccatacagcgtccaacatacagtaacgattgagattgaccacccggagctcagc
gttattgtggacacgagggaatggagacatttcaaagagctgaccaaaactgtcacacca
atagaagaagacatgttccatcttcatgataacgtcaggcctcaggtctatctgcgcccc
aaggagactgttcacattccgtttaaataccagaccttcttgatagatcctgttgtcatg
atgcagggtcctcctgaagtgaaattcagtaaagacacagatgctacaacaccctggaca
tccaatgctatgctgacaaaacacatcaaggtctccttcacggtgaatggtggaaagccc
ctcacaattctcagtgtgacagtggagccacagccccatgtggtggatcataccttccgc
ttctatcatccggagatgacattcttcaagaagtccctccggctcccaccttggcacacc
attccaggtgccccagctggagtgccaggaggggaacccgagatgtacgtccgctgcagt
gaccccaacatcgtttgtgagacaaaaaaaatgggtcccggggaaccacaggatgtgttt
ttaaaagtagctggaggaccaagtccacagatcaaaacattctttgttgctttttacacg
gacgcgtggctggctactcccctccagatctggcagttttatctccactcactacagcgg
gtggacgtcagctgcgtgactggacagttgactcgcctgtctttggtactcaggggcaca
caggcgatcaggaaagtgaaagcttatacctctcacatgcaggagctgaaggtggaccca
gaaggcatatttattctccctccgcatggagtgcaagatctgcacattggtgtgaggcct
cagaaaactggcaacaaatttatctacctcaacctcgtggatgtggagtaccatcagctt
gtgtcttcctggctggtctgtgtatcttgccgacagcctctcatttccaaggcctttgaa
ataacactccctgccggtggagggaaaggctcgaacaagcggatcacctacacaaacccc
tacccctcccggaggatgtattttctgcataccaaccggcctgacctgctgcaattcaag
gaggattcctttgagctcagaggtggggaggtatacaccatcggcttgcggtttgcacca
acccagaacactggtgaagaggagattctgatttatatcaatgaccatgaagataagaat
gaggaaaccttttgtgtgaaggttgtctaccaataa
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