Alligator sinensis (Chinese alligator): 102369218
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Entry
102369218 CDS
T02922
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04137
Mitophagy - animal
asn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102369218 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102369218 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102369218 (VCP)
03009 Ribosome biogenesis [BR:
asn03009
]
102369218 (VCP)
04131 Membrane trafficking [BR:
asn04131
]
102369218 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asn04147
]
102369218 (VCP)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102369218 (VCP)
Ribosome biogenesis [BR:
asn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102369218 (VCP)
Membrane trafficking [BR:
asn04131
]
SNARE
SNARE associated proteins
Others
102369218 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102369218 (VCP)
Exosome [BR:
asn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102369218 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
102369218
NCBI-ProteinID:
XP_025063281
UniProt:
A0A3Q0GU32
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC
PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG
HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR
ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA
RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI
PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES
EIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS
RGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattgcagctgttcagaggagacactgttttgttaaaaggaaagaagaggaga
gaggcagtctgcattgtcctgtcagatgatacctgctcagatgagaagattcgcatgaat
agggtggttcgcaacaacctgcgagtgcgcctgggtgatgtgatcagcatccagccttgc
ccagatgtgaagtacggcaaacgcatccatgtgctgccaatcgacgacacagtagagggg
atcacaggaaatctgtttgaggtctaccttaagccatacttcctggaagcatatagaccg
atcagaaaaggggacatcttcctggtgcgtggagggatgcgtgcagtggagttcaaagtg
gtggagacagaccccagcccttattgcatagtggctccagataccgtgatccattgtgaa
ggggagcccatcaaacgagaggatgaggaggagtcattgaatgaagtgggctacgatgac
attggaggctgcaggaagcagctagctcagatcaaggagatggtagagcttcctctcaga
caccctgctctcttcaaggccattggtgtgaagcctccccgtgggatactgctgtatggt
ccccctggcactggtaaaaccctgattgctcgtgcagtggccaatgaaaccggagctttc
ttcttcctgatcaatggtcctgagattatgagcaagctggctggagagtctgagagcaac
ctgaggaaagcctttgaagaagctgaaaagaacgctcctgccatcatcttcattgacgaa
ctggatgccattgctccaaagagagagaagacacatggagaggtggaacgccgcatagtg
tctcagctgctgactctgatggatggcctgaaacagagagcacatgtgattgttatggca
gcgaccaacagacctaacagcattgacccagccctcaggcgatttggtcgctttgacaga
gaggtagatatcggtatccctgatgccacgggacgcctggagatcctgcagatccacacg
aagaacatgaagctggctgacgacgtggatttggagcaggtggccaacgagacccacggc
cacgtcggcgctgacttggctgctctctgctcagaagctgctcttcaggccatcaggaag
aaaatggatctcatagacctggaagacgaaaccattgatgctgaagtaatgaactccttg
gctgtcaccatggatgacttcaggtgggctctgagccagagcaacccctcagctctgcgg
gagacagtagttgaagtgccccaagttacctgggaggatattggtggcctagaggatgtc
aagagagaactccaggagctcgtacagtaccctgtggagcacccagacaaattcctcaaa
ttcggcatgactccctccaaaggggtcctgttctatgggccccctggctgtggtaagaca
ctgctggctaaagccattgccaatgaatgccaggcaaacttcatctccatcaaggggccc
gagctgctcaccatgtggtttggcgaatccgaggccaatgtgcgcgagatctttgacaag
gcccgccaagcagctccctgcgtgctcttcttcgatgagctggactccattgcaaaggcc
cgaggcgggaacattggagacggtggcggcgctgcagaccgtgtcattaatcagatcctg
accgaaatggatggcatgtccaccaagaagaacgtcttcatcatcggtgccaccaacagg
ccagacatcatcgacccagccatcctgcgtcctggccgcctggatcagctcatctacatc
cccctgcctgatgagaagtcccgggttgctattcttaaggccaacctgaggaagtcacct
gttgccaaggatgtggatctggagttcctggctaagatgaccaacggtttttccggagct
gacctgacagagatctgccagcgtgcctgcaaactggccatccgtgagtccatcgagagc
gagatccggcgggagcgcgagaggcagaccaacccctcggccatggaagtggaggaggat
gaccctgtccctgagatccgcagagaccactttgaggaggccatgcgcttcgctcgccgc
tccgtcagcgacaacgacatcaggaaatacgagatgtttgcacagactctacagcagagc
cgtggcttcggcagcttcaggttcccatccggtaaccagggaggcgctggcccaagccaa
ggcacgggaggtggcagcggaggcaacgtgtacagcgaagacaacgatgatgacctctac
gggtaa
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integrated database retrieval system
