Alligator sinensis (Chinese alligator): 102369401
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Entry
102369401 CDS
T02922
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03030
DNA replication
asn03410
Base excision repair
asn03420
Nucleotide excision repair
asn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102369401 (RFC1)
03410 Base excision repair
102369401 (RFC1)
03420 Nucleotide excision repair
102369401 (RFC1)
03430 Mismatch repair
102369401 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asn03032
]
102369401 (RFC1)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102369401 (RFC1)
DNA replication proteins [BR:
asn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102369401 (RFC1)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102369401 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
AAA_22
AAA_5
BRCT_2
Rad17
AAA_30
RuvB_N
AAA_17
AAA_16
AAA_33
AAA_18
AAA_7
nSTAND3
RNA_helicase
AAA_19
NTPase_1
TCAD2
Motif
Other DBs
NCBI-GeneID:
102369401
NCBI-ProteinID:
XP_006029287
UniProt:
A0A1U7SC85
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDIRKFFGVVSTGKKNECEAAKKTEKTKNGEGTSAGKKKRKEIKVKNSSNEDDTPKKQTK
KKKRIIYDSDSEEETQSVKKSKKLPERKQSSSKPDTVLKQDPVVYVSETDEEDDFVKKTC
LKLKENGASAHSCQGTAGVRKEDAKPQAKSKPLSPGKLTPTSALDYFGTGSVQRSEKILV
SSKRKEPSQSRDSTLEDEAIAKILQLEEDAELERQLHEDEEFARTLAMLDETPKVKKVRN
DPEVKSTTLVTKMSPNTADKHKQSQKANSIDDGMNYNKKEQTKSESTRESCSRPEPSVDK
AMNKTLPLKPSSKLVALKQKEESKKKERESLSVAARERETSEKEEKATPKKERVSPKKPE
SVSPEDSEKKRVNYQAYRSFLNREGPKALGSKEIPQGGENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGSVSKKTNYLVMGRDCGQSKCDKASALGTKIIDEDGLFDLIQTMPGK
KSKYELAAEAEVNKAKSQGEKTPQKAGAAKKKNSSAKKETDSKKKKSTPGKGGSLKAFKK
ENAEVRKVLDFTQQAAETKHASNAEETFVSEISTGGTEGLLWVDKYKPTSVKTIIGQQGE
QSCANKLLRWLRNWHENTSENKHAKPSKFGGRDDGTNFKAALLSGPPGVGKTTTAALVCE
ELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSPSVSTKHVLIMDEVDGMAG
NEDRGGIQELIGLIKFTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSV
AYKEGLKIPPPAMNEIIMAANQDIRQVLHNLSMWCAKDKSLTYDKAKADASKAKKDIKLG
PFDVVRKVFAAGEETAHMSLIDKSDLFFHDYSLAPLFVQENYVHVKPIAAGNNLKKHLML
LSRAADSICDGDLVDTQIRRKQNWSLLPTQAIYASVLPGELMRGYMSQFPNFPSWLGKFS
STGKHERIIQELATHMSLRTNTCKRTVNIEYLSYLRDAIVRPLTSLGVEGVPDAVTFMDS
YCLMKDDVENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEAHLTPYALHVVKTSKRRA
GSTLTSELNEELNADELQSEEEQDTIENDAMIKQKKTKSSKVSKAEKSEEPKMEGKRKVK
MRR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggacatccgaaaattctttggggttgtatctactgggaagaaaaatgaatgtgaggca
gcaaaaaagactgagaaaaccaaaaacggggaaggaacttcagctggaaagaaaaagaga
aaggaaatcaaagtgaaaaattcatctaatgaagatgataccccaaaaaaacagacaaag
aagaaaaaaaggatcatctatgattcagattcagaagaggagactcagtcagtgaaaaag
tccaagaagctgcctgagagaaaacaatcatcttcaaaacctgatacagttctaaagcag
gatcctgttgtttatgtttcagagacagatgaagaagatgactttgttaagaaaacttgc
ttgaaactgaaggaaaatggggcgtcagcgcacagctgccaaggaacagcaggagtgaga
aaggaagatgcaaaaccacaagctaaaagtaaaccgttatctccaggaaaactgacacca
acttcagcacttgattattttggaactggtagtgtccaacgatcagagaagatactcgta
tcaagcaaaagaaaagagccttctcaaagcagagattccacactggaagatgaggccatt
gctaagatattgcagcttgaggaggatgcagagctggagagacagctgcatgaagatgaa
gaatttgctaggactttggctatgctggatgaaacaccaaaggtgaaaaaggtgcgtaac
gatccagaagtaaagtcaacaactttggttaccaagatgagtccaaacacagcagacaaa
cataagcagtctcaaaaagcaaactcaatagatgatggaatgaattacaataagaaggaa
caaactaaatctgaaagtacaagagaatcttgttcacgtccagaaccatcagttgataaa
gctatgaataagaccttgcctttgaaacctagttccaagctggtggctctgaagcaaaaa
gaagaaagcaaaaaaaaggagagagagagtctgagtgtagcagcgagagagagagaaact
tcagaaaaggaagaaaaagcaacaccaaagaaagagagagtttctcccaaaaagcctgag
tctgtaagtcctgaagactctgaaaagaaacgagttaactaccaggcctatcgaagcttc
ctcaatcgagagggtccaaaagccttggggtccaaagagataccacaaggaggtgaaaac
tgcttagaaggcctcacatttgtaattaccggagtcctggagtctattgaacgagatgag
gccaagtctttgattgaacggtatggaggaaaagtaactggcagtgtcagcaagaagacc
aattatcttgttatgggtcgtgactgtggtcagtctaaatgtgataaggcatctgcttta
gggacaaagattattgatgaagatggcctatttgatctgattcaaactatgcctggcaaa
aagtccaaatacgaattagcagctgaagcagaggtaaacaaagcaaagtcacaaggggag
aagaccccacagaaagctggtgctgccaagaaaaaaaatagctcagctaagaaagaaact
gattctaaaaaaaagaaatcaacgcctggaaaggggggcagtctcaaagcattcaagaaa
gaaaatgctgaagtgcggaaagttctggactttacgcagcaagcagcggagacaaaacat
gcctcaaatgctgaggagacttttgtttctgagataagcacgggtggaacagagggcttg
ctgtgggtggataaatataagcccacgtcagttaaaacaataatcggacagcaaggagaa
cagagctgtgctaacaaactgctacgatggctccggaactggcacgagaatacgtccgag
aacaaacacgcaaaacccagtaaatttggaggcagagatgatggtactaattttaaggca
gcattgctctcgggtccaccaggtgttggcaaaactactacagctgctttagtttgtgag
gaattgggctacagctatgtggagctgaatgccagtgacactcgtagcaagaacagtttg
aaagaagtggtggctgaatctctaaacaacaccagcatcaaagacttctgttccggaact
tccccttcagttagcacaaagcacgtactgatcatggatgaggtggatggaatggcaggc
aatgaagaccgaggaggaatacaggagttaattggattgatcaagtttacaaagatacct
atcatctgcatgtgtaatgatcggaaccatcccaaaattcgttctctggtccattattgt
tttgatcttcgttttcagagacctcgggtagaacagattaagggtgccatgatgtctgtt
gcatataaagaaggtttaaagatcccaccacctgcgatgaatgagataatcatggcagca
aatcaggacatcaggcaggttttgcacaatcttagtatgtggtgtgcaaaagataaatca
ttgacatatgataaggccaaagctgatgccagcaaagccaaaaaggacatcaaactgggg
ccctttgatgtcgtccggaaagtgtttgcggctggtgaggagactgctcatatgtctctt
atagacaaatcggaccttttcttccatgactactctctagcacctctctttgttcaggaa
aattatgtacatgtgaagcctatcgctgctggaaataacttgaaaaagcatttgatgctg
ctgagcagagcagcagatagcatctgtgatggtgatctcgttgacactcagattcgcagg
aagcagaactggagccttcttcctacgcaggctatttatgccagtgttcttccgggagag
ctgatgagaggttacatgtcccagtttcctaacttcccaagctggctggggaaattttcg
tctacaggaaaacatgagcgtatcattcaagaactggcaacgcacatgagtctcagaacc
aacacgtgcaagagaacagtgaacatagagtatttgtcatatttgcgggacgcaattgtc
agacccttgacaagtttaggagtagaaggtgtgccagatgctgtaacgtttatggattcc
tactgcttgatgaaagatgatgttgaaaatatcatggaaataagtagctggggaggcaaa
cctagtcccttctctaaactggatcccaaggttaaagcagcttttacacgcacctataac
aaagaggcccatctgactccatatgcactgcatgtagtgaagacatctaaacggcgagca
ggatccactctaacttcagaactgaatgaagaattgaatgctgatgaactccagtctgag
gaagagcaagatactattgaaaatgatgcaatgatcaagcaaaaaaagacaaagtcttcc
aaggtgtcaaaagcagaaaaaagtgaagaaccaaaaatggaagggaaaagaaaagtaaaa
atgaggcgatga
DBGET
integrated database retrieval system
