Alligator sinensis (Chinese alligator): 102369819
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Entry
102369819 CDS
T02922
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102369819 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asn03021
]
102369819 (SMARCA4)
03036 Chromosome and associated proteins [BR:
asn03036
]
102369819 (SMARCA4)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102369819 (SMARCA4)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102369819 (SMARCA4)
Chromatin remodeling factors
BAF complex
102369819 (SMARCA4)
PBAF complex
102369819 (SMARCA4)
GBAF(ncBAF) complex
102369819 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
102369819
NCBI-ProteinID:
XP_006023445
UniProt:
A0A1U7RP08
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPMPPQG
PGGYAQDNMHQMHKPMDSMHEKGLSDDPRYSQMKGMGMRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPGPGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLDAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQ
ALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMG
LGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR
AFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV
APRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI
LIIRRLHKVXXXXXXXXLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLT
DGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRAS
GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL
KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV
RVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEN
RYSAGSGSGSASFPHTASTLCLNAELEEPPVKEEDEVPDDETVNQMIARHEEEFDLFMRM
DLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDY
SDSLTEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDTDVGSATPTTSTRSRDKDDD
SKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPE
YYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSV
FTSVRQKIEKEEDSEGEDSEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTS
RGSRAKPVVSDDDSEEEQEEDRSGSGTEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccagatcctccaatgggagggacgcctcgccctggcccttctcctgggcct
gggccatcacctggtgcaatgttaggccccagccctggaccttcacctggctctgcacat
agtatgatgggaccgagccctggacccccatctgcaggacaccctatgccacctcagggc
cctgggggctatgctcaggacaacatgcatcagatgcacaagccaatggattccatgcat
gagaaggggctgtcagacgatcctcgttacagccaaatgaaggggatgggaatgaggcct
ggtggacacgcaggaatgggccctcctccaagcccaatggatcagcactcccaaggttat
ccttctcccctgggtggttcggagcacgcgtcgagcccagtcccagcgaacggtccatcc
tctggcccacagatgtcctccggtcctggaggagtcccattggatggtactgacccacaa
gcattagggcaacagaatcggggcccaaccccttttaaccagaaccagctgcaccagtta
agagctcagattatggcctacaagatgctggctagaggacagcccctacccgatcacctc
caaatggcagtgcagggaaaaagaccaatgcctggaatgcagcagcaaatgccgacacta
cctccaccctctgtatctgggacaggaccagtgcaaggaccaggacctgggcctggaccc
ggaccaacacctcccaactataacagacctcatggtataggagggcctaacatgccccct
cctggaccctcaggagtgcccccgggaatgcctgggcaaccgcctggtgggcccccaaag
ccctggcctgaaggaccaatggcaaatgctgcagcccccactagcacacctcagaaactg
attcctcctcaaccaaccggccgtccctcaccagcacccccagcggtacctccggcagca
tctcctgtcatgcctccccagactcagtcccccgggcagccggcccaacctgcccccatg
gtacagctacatcagaagcagaaccggatcactcccatccagaaacctagaggactcgac
cccgtggaaatcttacaggagcgagagtacagattgcaggctcggattgctcacaggatc
caagaattggaaaaccttcctgggtccctggctggtgacctgagaaccaaagctaccatt
gaacttaaagcactaaggctgctcaacttccagagacagctgcgtcaggaagtggtggtg
tgcatgaggcgggacactgctttggaaactgccctcaacgccaaggcctacaagcgcagc
aagcgacagtcgctgcgggaggcgcgcatcacagagaaactggagaagcagcagaagatc
gagcaggagcggaaacgcaggcaaaagcaccaggaatacctcaacagcattctccagcat
gcgaaggatttcaaagaataccaccgctctgtcacaggcaagattcagaaacttaccaag
gctgtggctacttaccatgctaacacagagcgtgagcagaagaaagagaatgagaggatt
gagaaggagagaatgcgccgcctcatggctgaagatgaggaagggtaccgcaagctgatt
gaccagaagaaagacaagcgcctggcctacctgcttcaacagacagacgagtacgtagca
aacctgactgaactggtacgtcaacacaaggctgcgcaggttgccaaggagaaaaaaaag
aaaaagaaaaagaagaaggcagagaatgcagagggacaaacgccggcaattggaccagat
ggggaacctctggatgaaaccagccagatgagtgacctccctgttaaagtgatccacgtt
gaaagcgggaagatccttactggcacagatgctccaaaggctggacaactggatgcatgg
ttagagatgaatccaggatatgaagtagctccaagatctgacagtgaagaaagtgggtca
gaggaggaggaggaggaggaagaagaggagcaaccgcagcctgctcagcctgccttgccc
gtggtagaggagaaaaagaagatcccagatccagacagcgacgacgtctcagaagtggat
gccaggcacattatcgagaatgcaaagcaagatgttgatgatgaatatggggtctctcaa
gcactggcgaggggattgcagtcttactatgctgtggcccacgcagtcaccgaacgggtg
gacaagcagtccacgcttatggtcaacggtgtactcaaacagtaccagatcaaaggtttg
gagtggctcgtgtccctgtacaacaacaacctgaatggcatcctggctgacgaaatgggt
ctgggcaagacgattcagaccatcgctttaattacatacctcatggaacacaaacggatc
aatggacccttcctcattatagtacctctctcaactctgtcaaattgggcgtacgaattt
gataaatgggctccttcggtggtgaaggtctcatacaagggctctcccgcagcaagacga
gcatttgtacctcagcttcgaagcggaaaatttaacgtcttgctcactacgtacgaatac
atcatcaaagataagcacattcttgccaagatccgttggaaatacatgattgtggatgaa
ggccacagaatgaagaaccaccactgtaagctaacccaggtcctgaacacacactacgtg
gcaccccggcgcttgctcctcaccggaactccactgcaaaataagctgccagagctgtgg
gctctgctcaatttcctgcttcccaccatcttcaagagctgcagcacatttgagcagtgg
tttaatgctccctttgccatgacgggagaaaaggtggatttgaatgaagaagaaaccatc
ctgattatccgtcgcttacacaaagtgcnnnnnnnnnnnnnnnnnnnnnngctgagaagg
ctgaagaaggaagtagaagcacagctgccagagaaggtggagtacgtgatcaagtgcgac
atgtcggcgctgcagcgggtcctgtatagacacatgcaggccaaaggagtgctgctcaca
gatgggtcggagaaggataaaaagggcaaaggcggtacaaaaacactgatgaacacaatc
atgcagctgaggaagatctgcaaccatccatacatgtttcagcacatagaggaatccttc
tcggagcatttaggctttactggaggtatagtgcagggactagatctgtaccgagcctct
ggcaaatttgagctcctagatcgaattcttcccaaactacgagccaccaaccacaaggtg
ctgctgttttgtcaaatgacgtccctcatgaccatcatggaagattacttcgcttaccgt
ggcttcaaatacctcaggttggatggaaccactaaagcggaagacaggggcatgctgctg
aagaccttcaacgagccaggctcagagtatttcattttccttctgagcacccgggcaggc
gggctgggcctgaatctccagtctgctgatactgtgattatttttgatagtgactggaac
ccacaccaggacctccaggctcaggaccgcgcccaccgcatcgggcagcagaacgaagtg
cgtgtgctccgcctctgcaccgtcaacagcgtggaggagaagatcctagcagcagccaag
tacaagctgaatgtcgaccagaaagtcatccaggccggcatgtttgaccagaaatcctcc
agccacgagcgccgggctttcctgcaggccatcctggagcatgaggagcaggatgagaac
agatacagcgcgggcagcggcagtggcagtgcaagcttccctcacactgcctccaccctg
tgcctgaacgctgagttggaggaaccacctgtaaaggaagaagatgaggttcctgatgat
gaaacggtcaaccagatgattgcccgccacgaagaggagttcgaccttttcatgcgcatg
gacctggaccgcaggcgggaggaggcgcggaaccccaagcggaagccgcgtctgatggag
gaggacgagctgccatcatggatcatcaaggatgatgcggaggtggagcgcctaacttgc
gaggaggaggaggagaagatgttcggacgcggctcgcgccaccggaaagaggtggactac
agcgactcgctgaccgagaagcagtggctcaaggtatacatggcaattgaggaaggcacc
ctggaggaaatcgaggaagaggtgcgtcagaagaagtcctcccgcaaacgcaagcgggac
acagatgtcggctcagccacaccaactaccagcactcgcagccgggacaaggatgacgac
agcaagaaacagaagaagcgtggacggccccctgctgagaaactctcccccaacccaccc
aacctcaccaagaagatgaagaagattgtggatgctgtgatcaaatacaaggacagtagt
agtggacgccagctcagcgaagttttcatccagctaccttcccgcaaggagctgcccgag
tactatgagctcatccgcaagcctgtggacttcaagaagatcaaggaacgcatccgcaac
cacaagtaccgcagcctgaatgatctggagaaggatgtcatgctgctgtgtcagaacgca
caaaccttcaatctcgaagggtctctgatctacgaggactccatagtgctacaatccgtc
ttcaccagtgtgcggcagaaaatagagaaagaggaagacagtgaaggtgaggacagtgag
gaggaggaggaaggagaagaggaaggatctgaatcagagtctcgatctgtcaaggtgaag
atcaaactgggacggaaggagaaggcacaggaccggttgaaggggcgcaggcgtacaagt
cgcggctcccgggccaagccagtggtcagcgatgacgacagtgaggaggagcaggaggag
gatcgctcaggaagtggcaccgaggaagattaa
DBGET
integrated database retrieval system
