Alligator sinensis (Chinese alligator): 102370146
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Entry
102370146 CDS
T02922
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04010
MAPK signaling pathway
asn04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102370146 (CACNA1H)
04020 Calcium signaling pathway
102370146 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asn04040
]
102370146 (CACNA1H)
Ion channels [BR:
asn04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102370146 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102370146
NCBI-ProteinID:
XP_025060431
UniProt:
A0A3Q0GL31
LinkDB
All DBs
Position
Unknown
AA seq
2515 aa
AA seq
DB search
MRGGGTDLVSPLCSAVQVPAAIMTDGERREPFQPPASEEVRVPIASLPSQAPRPGEDEDA
LSACKSIQGSLGSGGSPTRDPARELGSEEEEQVPYPALAPTVFFCLKQTTRPRSWCLKLV
CNPWFEHVSMLVILLNCVTLGMFQPCEDVKCKSERCTILEAFDHFIFAFFAVEMVIKMVA
LGIFGQKCYLGDTWNRLDFFIVMAGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMR
ILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSNFAMTYNLTFLHP
YYQPDGEDNPFICSSHRDNGMQKCSNIPNNKEYKVECTLSMDSYTQNLYNPEFSNRNACI
NWNQYYNVCVAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIY
FILLIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYE
ELLKYICHIFRKVKRRTLRLYNNWQSKRRKKVNPNSTTNGQSRRGRKRITSIHHLIHHHH
HHHHHHYHISNGSPRGPRSNPEICGLELKVMKPGGQLTLPSPSPNLQSPPAPDSESVHSI
YHADCHVEAPQVKCKSSNTPTSIKLAAGLTNHGNMNYPTILPSPASKANSIPGPKGKKNG
SSPVPMVNSPVRLNADSFGKLQHLMGEHGLRRASSRLSGLNLPCPLPSPQASMLTCELQN
CPYCASILEDPEFEFSESDSYDSDNNGVYEFTQDLRHGDQRDQIQQQRNKRRKKKKKPKE
KNKVARLWSAFGNKLKKIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIV
FTSMFALEMLLKLLAFGIFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRV
LKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTETGDTV
PDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLV
AILVEGFQAEGDANRSDTDEDKTSANFEEDFEKLKDLRAAGGEMKMYSLAVTPNGHLEAR
GSMPPPIIMRTAATPMPTPKCSPHMDSVHTFVDSRRGSNASIDPLSYDQKSLSSLRSSPC
ANWGPSSNWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDESDDAKSSTVSR
ASLHRQAESLDYRSSLDLPELLQLPSMRHSLSINPMAMLPTEYQDCNGKMMHVPSEFFLR
IDSHKDDPLDYDDDMEDSYCYRIRKILEPYKPEWCKNHEDWSLYLFSPQNRFRAMCQKVI
AHKMFDHVVLVFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALG
FFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVIS
RAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGSDTKNITTKA
DCTNARYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPSQNHNPWM
LLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRR
PYYADYSPARRYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFT
IVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCS
EDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISP
VYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGAATPASSGGG
GSTAASDGRAPYGSQEGGKLESPLRVKQQALEALSCENVSLAMPDSDPLEGGETPVMQHT
SFCSVPHHHVPTPSHKAPGHGSEEGAACLWAKKESQNFLTVRKISVSRMHSLPNDSYMFR
PVIPAKPPYPLHEVEMESYPCKSQRGSITSTRSQPVGTSSSLRIPTECLQLTAGPSYRNT
RDLWKMHPPTAAPRSPSLNRLLCRQVGDRTESVDGQKAETKDNVQEESGESLQPKKPSQS
TLSPPLLHPAPLSLPGTPPHSPASPSHHRHSSVRTRKHTYSQHSIPSRASSESSDPLHPG
NSLFESSDLADEEVSHINSSAKDWREAPGSRSLSVSPFASLASSPAHRKNCSTTSLAGSG
GSREKDLKKFYSVDTKGFLNKPSWADDQRRHSIEICPSLDDGDCSFEQPAEGAPRSPIHV
QLESEYVHGARRKKKMSPPCISIDPPMEDESGAASRTKASENSLLRRRTPSCESAAYRDS
LDLAENPPGEQPSKAEXXXXGEHLAIPNFSFEQSDTSSLSSLSELLLDSGQSSPSSGESR
PDPAALELKKPEPLKTQCNHPETNKELLVVTKSPLRKHGLVSMTVATDEDIEEPV
NT seq
7548 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggggtggcacggacttggtttcccccctttgttctgctgtccaggtcccggct
gctatcatgactgatggcgagaggagagagcccttccagccgccggcgagcgaggaggtg
cgggtgcccatagcctccctccccagccaggcgccccggcccggggaggacgaggatgct
ctcagcgcctgcaagtcgatccagggcagcctgggctcggggggctcccccacccgggat
ccggctcgggagttgggctcagaggaggaggaacaggtcccttacccggcactggcgccc
accgtcttcttctgcctcaagcaaaccacccggccgcgcagctggtgcctcaaactggtc
tgtaacccctggttcgagcacgtcagcatgctggtcatccttctgaactgcgtcacgttg
ggcatgttccagccctgcgaagatgtgaagtgcaagtccgagcggtgcactatcctggag
gcatttgaccacttcatctttgccttctttgctgtggagatggtcatcaagatggtagcc
ttggggatcttcgggcagaagtgttacctgggagatacgtggaatcgcctggacttcttc
atcgtaatggctggcatgttggaatattcgctggatggacacaatgtaagcttatccgcc
atccgaaccgtccgggtactcaggcctttacgagccattaacagggtcccaagtatgcga
atactcgtcaccctgctgttagatactctgcctatgttaggcaacgtccttctcttgtgc
ttctttgtcttcttcatctttgggatcgtcggcgtgcagctctgggcagggctgctgaga
aacaggtgtttcctcgacagcaattttgcaatgacatataacctaactttcctgcatccg
tattatcagccagacggggaggataatccattcatctgctcgtcccatcgggataacggc
atgcagaaatgctccaatatcccaaacaacaaggagtacaaagtggagtgcaccttgagc
atggactcctacacccaaaatttgtataacccagaattcagcaacagaaatgcctgcata
aactggaaccaatattacaacgtatgcgtggcaggagatgtgaacccacataatggagct
attaattttgataatattggctatgcctggatagctatttttcaggttataaccctggaa
ggatgggttgacatcatgtattatgttatggatgcacattctttttacaattttatatat
tttatattgcttataatagttggttctttcttcatgattaacttgtgcctggttgtgata
gcaacacagttttctgaaacaaaacagcgggagaaccagctgatgcaagagcagcgggcc
cgctacctctccaacgacagcacaattgccagtttctcggagccaggcagctgctacgag
gagctcctcaaatatatctgccacatcttcaggaaggtgaagcgccggacgttacgcctg
tacaacaattggcagagcaagcgccggaaaaaagtcaaccccaacagcaccaccaacggg
cagagccgccggggcaggaagcgcatcacctctatccatcacctcatccaccaccatcac
caccaccaccaccaccactaccacatcagcaacggcagcccccggggcccgcgctccaac
ccggagatctgcggcctggaactgaaggtcatgaagccgggaggccaactcacgcttcct
tctccatcgcccaatttgcagagccctcccgctcccgattcggagtcggtgcatagcatt
taccacgccgactgccacgtcgaggccccccaggtgaaatgcaagtcttccaacaccccc
acaagtattaagctggctgctgggctcaccaaccacggcaacatgaactacccgaccatc
ctgccttctccggctagcaaagccaactctatcccagggcccaaagggaagaaaaacggc
agctcgcctgtgcccatggtgaatagcccggtgcgcttgaatgcggattcgtttgggaag
ctgcaacacctgatgggagaacacggtctgcgcagggcttccagcaggctgtcggggttg
aacctgccgtgcccactgcccagcccccaggccagtatgctgacctgcgagctgcagaac
tgcccctactgtgccagcatcctggaggaccccgagttcgagttcagcgagtccgacagc
tacgactccgacaacaacggggtgtacgagttcacacaggacctgcggcacggggaccag
cgggatcagattcagcagcagaggaacaagaggaggaagaagaagaagaaacccaaggag
aagaataaagtggccaggctgtggtcggcttttggcaacaagctgaaaaagatcgtggag
agcaagtatttcaaccgggggattatgatcgccattctgatcaacacgctgagcatgggg
atcgagtaccacgagcagccggatgagctgaccaacgccttggagatcagtaacattgtc
ttcaccagcatgtttgccctggagatgctcctcaagctcctggcctttggcatcttcggt
tacatcaagaacccatacaacatcttcgatgggatcatcgtcatcatcagcgtctgggag
atcatcggccagtcggacggaggcctttctgtgctacgaacttttcggctgctcagagtc
ctcaagctggtgcgtttcatgcccgcccttcgccgtcagctcgtggtcctgatgaagacg
atggataacgtggccaccttctgcatgctgctcatgctcttcatattcattttcagcatt
ctcggcatgcatctttttggatgcaagtttagcttgaaaacagaaacgggggacaccgtt
ccagacagaaagaacttcgattccttgttgtgggccatcgtgaccgtctttcagatcctc
acacaagaagactggaacgtggtgctctacaacgggatggcatccacctcctcgtgggcc
gcgctgtacttcgtggccctgatgaccttcggcaactacgttctcttcaacctcctcgta
gccatcttagtcgaaggcttccaagcagagggtgatgccaacaggtcagacacggatgag
gacaagacgtctgccaacttcgaggaggattttgagaagctgaaagacctccgggcagca
ggtggggagatgaagatgtactctttggccgtcaccccaaacggacacttggaggcccgg
ggaagcatgcccccacccatcatcatgcgcaccgccgctacgcccatgcctacgcccaag
tgctcgccgcacatggactcggtgcacacctttgtggactcgaggagagggagcaatgcc
tcgatagatcccctgagctacgatcaaaagtccttgtccagcctccgcagctcaccctgt
gcaaactggggacccagcagcaactggggaagccggcgctcaagctggaacagtctaggc
cgggccccgagcctcaagaagaagaaccagtctggggaaagggagtccctgctgtccgga
gaggggaaagggagcacggacgacgagtccgacgatgccaagtccagcaccgtcagcagg
gcgtccttgcaccgccaggcagagtccttggattacaggagttccttggacttgcccgag
ctcctccagttgcccagcatgcgccattccctcagcatcaaccccatggccatgctgccc
actgagtaccaggactgcaacggcaaaatgatgcacgtgcccagcgagtttttcctgcgc
atcgacagccacaaggacgaccccttggactacgatgacgacatggaggatagttactgc
tacaggatccgcaaaatactggagccctacaaaccggagtggtgcaagaatcacgaagac
tggtccctctatttgttttctccgcaaaatcggtttcgagctatgtgtcagaaggtgatc
gcccacaagatgtttgaccacgtggtgctcgtcttcatcttcctcaactgcatcacgatc
gctctggagaggcccgacatcgacccccacagcacggagaggatattcctcagcgtctcc
aattatatcttcactgcgatcttcgtggctgagatgatggttaaggtggtggctctcggc
ttcttctctggagaaaacacctatctccaaagcagctggaatgtcctcgatggggtcctg
gtctttgtctccatcatcgacattattgtctccatggcatcggccggcggggctaagatc
ctgggcgtccttcgcgtcttaagactgctgcgaaccttgaggcctctccgagtcatcagc
agagcccctggtctgaagctggtggtggagactttgatatcgtctctgaggcccattggg
aatatcgtgctcatctgctgcgctttcttcatcatctttgggatattaggagtgcagctt
tttaaaggcaagttctactactgcgaagggtcagacaccaagaacatcaccacaaaagcc
gactgcaccaatgcacgctacaagtgggtccgacggaagtacaactttgacaacttaggg
caggctctgatgtccttgtttgtcctttcatccaaagatggctgggtgaacatcatgtat
gacggcctggacgctgtgggcattgaccagcagcccagccagaaccacaacccttggatg
cttctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaatatgtttgtg
ggggtggtggtggagaacttccacaagtgccggcagcaccaagaagcagaagaggcccgt
cggcgggaggagaagcggctgaggcgcctggagaaaaagcgcaggaaagcccagcgccga
ccctactacgccgactattccccagcccggaggtacatccataccctctgtaccagccac
tatctggacctgttcattacgttcatcatcggtgtcaacgtcatcactatgtccatggag
cactacaaccagcccaagtccctggatgaagcactgaagtactgcaactacgtgttcacc
atagtttttgtgtttgaagctgttctcaagttggtggcatttggttttcgacgattcttt
aaagacagatggaaccagcttgaccttgccattgttctgctctccatcatgggcatcacc
ctggaggagattgaaatgaatgcggcgctccccatcaatcccaccattatccggatcatg
cgggtgctgagaatagcaagagtactgaaactgctcaaaatggccaccggcatgcgagct
ctcttggacaccgtggtgcaggcgttgccccaggtagggaaccttggcctactttttatg
ctcctgttttttatctatgctgccctgggagtggagttgtttggaaagcttgattgcagc
gaagacaatccctgcgagggcttgagccgccacgccaccttcaccaacttcggcatggcc
ttcctcaccctcttccgggtgtcgactggagacaactggaacggcatcatgaaggacacg
ctccgagagtgcacccgggaggacaagcactgcctcagctacctgccggtcatctccccc
gtctacttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggcc
gtgctcatgaaacacctggaggagagcaacaaagaagccaaggaggatgccgagatggac
gccgagatcgagctggagatgtcccgcggagctgccaccccggccagcagtgggggtgga
gggagcaccgctgcctccgacggcagggccccgtacgggagccaggagggcgggaagctg
gagtcacccctgcgagtgaaacaacaggcactggaggcactgagctgtgagaacgtgtct
ttagccatgccagactcagacccgctggagggcggagagactcccgtgatgcagcacacg
tccttctgctctgttcctcaccaccatgtcccgacaccttcccacaaagcccccggccac
gggtcagaggaaggagctgcctgcctctgggcgaagaaggagtctcaaaacttcctgact
gtccgcaagatctcggtgtccaggatgcactccttgccgaacgacagctacatgttccgc
cccgtgatacccgccaaaccaccgtacccgctgcacgaggtggagatggagagctacccc
tgcaagtcacagagagggtccatcacctctacccggtcccagcccgtggggacaagctcc
tctctgcgaatccccaccgagtgtcttcagctgaccgccggaccgtcttaccgcaacacc
cgggacctttggaagatgcatcccccgacggccgccccgcgatctcccagcctcaaccgg
ctgctgtgtaggcaggtaggagaccggactgaatccgtggatgggcagaaagcagagacc
aaggacaatgtgcaggaagagtccggcgagagcctgcagccgaaaaagccgtcccagagc
accctaagcccccctctgctgcatcccgcccctctctccctgccgggcacccctccgcat
tcccctgcctcaccgtcgcaccacaggcactcgagcgtccgcacccgcaagcacacgtat
agccagcacagtattcccagccgggcttcgagcgagagcagcgacccgctgcaccccggg
aactcgctcttcgagtcctcggacctggcggacgaagaagtcagccacatcaacagctcg
gcgaaagactggcgggaggcgcccggatcgaggagcctctccgtctccccttttgcctcc
ctggcttcctcgccagcccaccgcaagaactgcagcacaaccagcctggcagggagcggc
gggagcagagagaaggacttgaagaagttttacagtgttgacacgaaagggttcctgaac
aagcccagctgggcagacgaccaaagacggcactccatcgagatctgtccctcgctggac
gatggagactgcagctttgagcagccggcggagggcgcgccacgctcgcccatccacgtt
cagctcgagtccgagtacgtccacggggctcggaggaagaagaagatgagcccgccgtgc
atttctatagatcctcccatggaggacgaaagcggcgcggcctcccgtaccaaagcatcc
gagaacagcctgctgcggaggaggacgccctcctgcgaatccgcggcctacagagattct
ttggacctggccgaaaacccgccgggggagcagccctcgaaagcggagcnnnnnnnnnna
ggggagcatctggccatcccgaacttctccttcgagcagtcggacaccagctccttgagc
agcctctcggagctcctgttggacagcggccagtcctcgccctcctccggggaatcccgc
ccggaccccgcggcgctcgagctgaagaagccggagcctttaaaaactcagtgcaaccac
ccggagaccaacaaggagctcctcgtggtcacgaagagccccctacggaagcacggactg
gtctctatgaccgttgcaacagatgaagacatagaggaacccgtatag
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integrated database retrieval system
