Alligator sinensis (Chinese alligator): 102370166
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Entry
102370166 CDS
T02922
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asn04515
]
102370166 (PCDH17)
Cell adhesion molecules [BR:
asn04515
]
Cadherins
Protocadherins
102370166 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102370166
NCBI-ProteinID:
XP_025065948
UniProt:
A0A3Q0H695
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
LAPPAERGAGGGRGAKASFRVLENSAPHLLDVDGESGLLYTKQRLDREALCRRSAKCQLS
LEVFANDQEICMIKVEVQDLNDNAPAFPADQVDMDISENAAPGTRFPLTSAHDPDAGDNG
LRTYLLTRDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSG
TVQINVRLIDSNDNSPVFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGY
APDRVRDLFSIDPQSGLIRVKGNLDYEESGLVEIDVQARDLGPNPIPAHCKVTVRLVDRN
DNAPAIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGSGPGAVPFT
LEENYDNFYTVVTDRPLDREAQDEYNVTIVARDGGSPPLNSTKSFSVRILDENDNPPRFS
KNLYVLQVPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGA
IYALRSFNYEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPTLINDTAE
LQVPRNAGVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEE
LSPVAELVVKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIV
TLSTVSIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGAGAGGSGGS
KGKKKKISKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVM
YLKPASNNLTVPQGHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQ
SSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTASTKSQPLEPAF
PTLLSFAILTLHTITSRLQSVDLLLPEETLKPYGLVNEKQQGRGQRPIVGICGPARCEEG
KFSEQEECVNCTDECRVLGHSDRCWMPQFPTANQAENADYRTNLFVPTVEANVETETYET
VNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASNSPTKTCIEPCTS
TKGPLDGCEVKSGALAEPSSQYLSTDSQYLSPSKQSRDTTFIASDQMARVFADVHSRVNR
DSSEMDSVLEQLDHSNRDLGRESVDAEEVVREIDKLLQDCRGSDPVAVRK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
ctggcgccgccggcggagcggggcgcgggcggcgggcgcggggccaaggcgagcttccgc
gtgctggagaactcggccccgcacctgctggacgtggacggcgagagcgggctgctctac
accaagcagcgcttggaccgcgaggcgctgtgccgccgcagcgccaagtgccagctgtcg
ctcgaggtctttgccaacgaccaggagatctgcatgatcaaggtggaggtgcaggacctg
aacgacaacgcgcccgccttccccgccgaccaggtggacatggacatctcggagaacgcc
gcccctggcacccgcttccccctcaccagcgcccacgaccccgacgcgggcgacaacggg
ctgcgcacctacctgctcacccgcgacgactacgggctcttctcgctggacgtcaagtcc
cgaggggacggcaccaagttccccgagctagtgatccagaagccgctggaccgcgaggag
cagagccaccacacactggtgctcacggcgctggacgggggcgacccgccgcgctcgggc
accgtgcagatcaacgtgcgcctcatcgactccaacgacaacagccctgtcttcgaagcg
gcctcctacgtggtggagctgcctgagaacgcgcccctgggcacggctgtcatcgacctc
aacgccaccgacgccgacgagggcaccaatggcgaggtgctctactccttcagcggctac
gctcctgaccgggtgcgtgacctcttcagcatcgacccgcagagcggcctcatccgcgtc
aagggcaacctggactacgaggagagcggcctcgtagagatcgacgtgcaggcccgcgac
ctggggcccaaccccatccctgcccactgcaaggtcaccgtacgccttgtcgaccgtaat
gacaatgcgcccgccatcggctttgtctctgttcgccagggggctctcagcgaggccgcc
ccgccaggcaccgtcatcgctttggtgcgggtcactgatcgtgactcaggcaagaatggg
cagctccagtgccgggtgctgggtggcgggggcagtggtccaggtgccgtacccttcaca
ctggaggagaactatgacaatttctacacagtggtgactgaccggccactggaccgtgag
gcacaggatgagtacaatgttaccattgtagcccgtgatggtggcagccccccgctcaac
tccaccaagtctttctctgtgcgcatcctcgacgagaacgacaacccaccccgcttcagc
aaaaacctctatgtcctacaggtgccagagaacaatatccctggtgagtacttgggctct
gtgctggcccaggacccggacctggggcagaatgggactgtctcctattccatcctgccc
gggcatgtaggcgatgtctccatctacacctatgtctctgtcaaccccaccaatggtgcc
atctatgccctgcggagcttcaactatgagcagaccaagcactttgagttccgcgtgctg
gccaaggactccggctctccccaccgcgagagcaacgccactgtgcgtgtcactgtgctt
gatgtcaatgacaatgcaccacttattgtgctgcccaccctcatcaacgacactgccgag
ctccaggtgccgcgcaatgctggcgtgggctaccccgtgggcactgtccgagccctggac
agtgattttggggagagcgggcgtctcacatatgagatcgttgaaggcaacgaggagcac
ctctttgagatggacccaaccagtggtgagatacgcaccttgcatccctattgggaagag
ctcagccctgtggctgagctggtggtcaaagtcagtgatcatggcaagcctagcctctca
gctgtggctaagctaattgtcagggccttggctggacccctgcctgaagccggtgagcct
caggtgaatggtgagcagcatcggcgacctcactgggacctatcgctacccctgattgtg
accctgagcactgtctctatcatcttgttggctgccatgatcaccattgctgtgaaatgc
aagcgggagaacaaggagatccgcacctataattgtcgcattgctgaatacagccacccc
cagctgggaggagggggaggcagtggtgggggagcaggtgcaggtggcagtggagggagc
aagggcaaaaagaagaagatcagcaagaatgacattatgctggtgcccagtgaaggcgag
gacagtcggggccccctaaatgtcatgaacgtggtgagcagcccctctttggccacctca
cccatgtactttgactaccagacccgtctgcccctcagctcaccccggtctgaggtgatg
tacctaaagcctgcctccaacaacctgactgtaccccagggacatgtgggttgccacacc
agcttcacggggcaaggaactaacgccagcgaggctccaccgagccggatgtccataata
cagacagacaattttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaa
agtagctccacgttcaaggacccagaaagagccagcttgagggacagcgggcatggggat
agtgatcaggctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgtt
agggaggcactcaagatgaaaactgcttcaactaaaagccagccgctcgaaccagcattc
ccgactttgctttcctttgctatcctcaccctacacaccatcacaagtagacttcagtct
gttgatctgcttctgccagaagaaacacttaaaccttatggactggtgaatgaaaaacag
caaggcagaggccaaagacccattgttgggatctgtggaccagcccgctgtgaggaagga
aaattttcagaacaagaagagtgtgttaactgtacagatgaatgcagagtccttggtcat
tctgacaggtgttggatgccacagttccctacagccaatcaggctgaaaatgcagattat
cgcacaaatctctttgtacccacagttgaagctaatgttgagactgagacttacgaaact
gtgaatcccaccgggaaaaagactttttgtacatttggaaaagacaagagagagcacact
attctcattgccaatgttaaaccttatttaaaagccaaacgtgccctgagtcctcttctt
caggaggttccctcagcatcgaacagcccaaccaagacatgcattgagccttgcacctca
acaaaaggaccactggatggttgtgaagtaaaatcaggagccttggctgaaccaagcagc
cagtacctgtcaactgacagtcagtatctatcacctagtaaacagtcaagagacactaca
ttcattgcatcagatcagatggctagggtctttgcagatgtacattcccgagtgaaccga
gactcaagtgagatggactctgttctggagcagttagaccattcaaaccgggatctaggg
agagagtcagtggatgcagaggaagttgtgagagaaattgacaagcttttacaggactgt
cggggaagtgaccctgtggctgtgagaaagtga
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