KEGG   Alligator sinensis (Chinese alligator): 102371374
Entry
102371374         CDS       T02922                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102371374 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:asn03041]
    102371374 (CDC40)
Spliceosome [BR:asn03041]
 Complex C
  Other components
   Step II factors
    102371374 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 PQQ_2
Other DBs
NCBI-GeneID: 102371374
NCBI-ProteinID: XP_025054655
UniProt: A0A3Q0G885
LinkDB
Position
Unknown
AA seq 492 aa
MFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFVTYGYALDPSIDSPE
VATKYIGSVEEAEKNQGLTVFETGLKKTEKRKKFKENDASNIDGFLGPWAKYVDEKEVAK
PSEEEQKELDEITAKRQKKGKQEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRS
TVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGERRCLRT
FIGHSKAVRDICFNNAGTQFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDK
QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW
DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV
AGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVI
TCGWDGLIKLWD
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtttgcaccagagtttgggccagaaaacccatttaggactcaacagatggctgcacct
aggaatatgctttctggatatgcagaaccagcacacatcaatgatttcatgtttgagcag
cagagaagaacatttgtaacctatggttatgcattggatccctctatagatagtcctgaa
gttgccactaagtatattggttctgtagaagaagcggaaaagaatcaaggtttaacggtg
tttgaaacagggctaaagaaaacagaaaagaggaagaaattcaaagagaatgatgcatct
aatattgatggcttcttgggtccatgggcaaaatacgtggatgaaaaagaagtggccaaa
ccttcagaagaagaacagaaggagttggatgaaataacagcaaagagacagaagaaaggt
aaacaggaagatgataagcctggagaagaaaagactatattacacgtcaaagaaatgtac
gactaccaagggagatcatatcttcatgttcctcaagatgttggagttaacctccgttct
acagtaccacctgagaaatgctatcttccaaagaaacaaatccatgtatggtctggacat
acaaagggtgttagtgcagtcaggttatttccactctctggccatatgttgctgtcttgc
tccatggactgtaaaattaagctatgggaagtatatggtgaacgaagatgcctacgaaca
ttcattggacacagtaaagctgttcgcgacatctgctttaacaacgctgggactcagttt
cttagtgcagcatatgaccgttatattaaactctgggacactgaaacagggcagtgtatt
tccaggttcacaaacaggaaagtcccttactgcgtgaaattcaatcctgatgaagataaa
caaaatctttttgtggcaggaatgtctgataagaaaattgtccagtgggacattcgtagt
ggggagattgtacaggagtatgatcggcatctcggagctgtcaataccattgtgtttgtg
gatgagaatagacggtttgtgagtacttctgatgacaagagcttaagggtgtgggaatgg
gacattcctgtagacttcaagtatatagcagagccaagtatgcactcgatgcctgcagtg
actttgtctccaaatgggaaatggctggcttgtcaatcaatggacaatcaaattttgatt
tttggagctcagaatagattccgactaaacaaaaagaaaatcttcaagggtcacatggtg
gctggctatgcttgtcaagtggatttttcacctgatatgagctatgtaatctcaggcgat
gcagatggaaaacttaacatatgggactggaagacgacaaaactctacagcaggttaaaa
gcacacgataaagtttgtataggtgcagtctggcacccacatgaaacatccaaggtgatc
acatgtggctgggatggtcttattaaattgtgggactga

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