Alligator sinensis (Chinese alligator): 102371422
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Entry
102371422 CDS
T02922
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102371422 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asn04131
]
102371422 (VPS35)
Membrane trafficking [BR:
asn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
102371422 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Motif
Other DBs
NCBI-GeneID:
102371422
NCBI-ProteinID:
XP_006034321
UniProt:
A0A1U7S401
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MDSGFNRRNPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGE
LRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLI
TVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEET
TGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEG
VNVERYKQIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQN
VNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQV
SLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNI
LTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQP
DQPAEDPDPEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPL
VFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAG
EIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQ
CALAASKLLKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD
PSLQVQLFIEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHN
TLEHLRLRRESPESEGPIYEGLVL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggactcgggcttcaacagaagaaatccaacaacacagcagtctcctcaagatgagcag
gaaaaactcctggatgaagccatccaggctgtgaaggtgcagtctttccagatgaagcga
tgtttggacaagaacaaactcatggatgctctgaaacatgcctccaatatgcttggggag
ctgcggacttctatgttgtctccaaagagctattatgagctttatatggctatttctgat
gaactgcactacctggaagtatacctgacggatgagtttgccaaggggaggaaggtggcc
gatctttatgaactagtccagtatgctggtaatattatcccaagactctatcttctgata
acagtaggtgttgtttatgtcaagtcctttcctcagtccaggaaagatattctgaaagat
ctggtggaaatgtgccgtggtgtacaacatcctttaagaggcctgtttcttcgaaactat
cttcttcagtgtaccaggaatatcctgccagatgaaggcgagcagacagatgaggaaacc
actggagacatcagtgattcaatggattttgtgctgctgaactttgctgaaatgaacaaa
ctctgggtgcgaatgcaacaccaaggacacagtcgagatagggagaagagagagcgggaa
aggcaggaacttagaatcctagtgggaacaaatctggttcgccttagtcagctggaaggt
gttaatgtggaacgatataaacaaattgttttgccagggatattggaacaagtggtaaac
tgcagggatgctctagctcaggagtatctcatggagtgcattatacaggttttcccggat
gaatttcatctccagaccctgaatcctttcctccgagcctgtgctgagttgcaccaaaat
gttaatgtgaaaaacataatcattgctttaattgacagactagctttatttgcacaccgt
gaagatggtccagggatcccagcagatattaagctttttgacatcttttcacagcaggtg
gctactgttatacagtctagacaggatatgccttcagaggatgtagtgtcgttacaagta
tcacttattaacttggctatgaaatgctatccggatcgtgttgactacgttgacaaagtg
ttggagacaactgtggaaatctttaacaaacttaatctagaacatattgcaacaagcagt
gctgtttcaaaggagctaactagacttttgaagatcccagttgatacctataataatatc
ctcacagtgctgaaattaaagcatttccatccactctttgaatactttgactatgagtcc
agaaaaagcatgagttgttacgtgcttagcaatgtactggattataacactgaaattgtc
tctcaagagcaggttgatgcgatcatgaatctggtatcgacgttgatccaggaccaacca
gatcagcctgctgaagaccctgatcccgaggactttgcagatgaacagagccttgtggga
agatttattcaccttctgcgttcagatgacccagatcagcagtatttgatcttgaacaca
gccaggaaacactttggtgcaggtgggaaccagcgtattcgttttacactaccacctctg
gtctttgctgcataccagcttgcgtttcgctacaaggagaattccaaagtggatgacaaa
tgggaaaagaaatgccagaagatcttctcatttgctcatcagaccatcagtgctttgatc
aaagcagaattggcagagttgcctctccggctatttctacagggagcactggctgctgga
gaaattggttttgaaaaccatgaaacagtggcctatgaatttatgtctcaggcattctca
ctgtatgaagatgaaatcagtgattcaaaagcacagctggctgcaatcaccttgataatt
ggaacatttgagaggatgaaatgcttcagtgaggagaaccatgagcctctgcggactcag
tgtgcactggcagcttcaaagctgcttaagaaaccagaccagtgccgggctgttagcact
tgtgcacatctgttttggtctggtcgcaacactgacaagaacggagaggagcttcatgga
ggaaagagagtaatggagtgcttgaaaaaggctctgaaaatagcaaatcaatgcatggat
ccttcactgcaagttcagctttttatagaaattctgaacagatacatctatttttatgaa
aaggaaaatgaagcggtgacaattcaagttttgaatcagctcatacaaaagatacgagaa
gacctgccaaatcttgaatctactgaagaaacagaacagattaacaaacactttcacaac
acactggagcacttgcgtttgaggagggaatcgccagaatcagagggtccaatttatgaa
ggtcttgtcctttaa
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