KEGG   Alligator sinensis (Chinese alligator): 102371788
Entry
102371788         CDS       T02922                                 
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X2
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03272  Virion - Hepatitis viruses
asn03273  Virion - Lassa virus and SFTS virus
asn04140  Autophagy - animal
asn04142  Lysosome
asn04145  Phagosome
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    102371788 (LAMP1)
   03272 Virion - Hepatitis viruses
    102371788 (LAMP1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102371788 (LAMP1)
   04142 Lysosome
    102371788 (LAMP1)
   04140 Autophagy - animal
    102371788 (LAMP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asn04131]
    102371788 (LAMP1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asn04147]
    102371788 (LAMP1)
   04090 CD molecules [BR:asn04090]
    102371788 (LAMP1)
Membrane trafficking [BR:asn04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    102371788 (LAMP1)
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    102371788 (LAMP1)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    102371788 (LAMP1)
Exosome [BR:asn04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   102371788 (LAMP1)
CD molecules [BR:asn04090]
 Proteins
  102371788 (LAMP1)
SSDB
Motif
Pfam: Lamp2-like_luminal Lamp2_2nd
Other DBs
NCBI-GeneID: 102371788
NCBI-ProteinID: XP_006017310
UniProt: A0A1U7RC59
LinkDB
Position
Unknown
AA seq 421 aa
MARPRVPVLLAAAAALLGFLQTSFSFEVKESGKICITADLLVNFSVEYPAKGHQEMANFA
LPQTGTVLLHNSTCGKGDAPTPVLVIGFGMGQSLSLKFMKTSNQYRVEELTFSYNLSDAA
FFPSASAGGTMEVSQKTDIQANLGTRYQCISTDQVNMKNVNVTLSNVTLEAYLVNNTLSV
NEYECTRDKPMTTIATTTARQTTSQVPTTTSPAPTTLPQNPAVGKYNVTGKNGTCVLASM
GLQLNVSYESKDGKTGLDVLNFIPSNTSFSGNCDNSSAFLNLTFGKAKLIFHFVRNTSIE
KFFLQGVTVSTTLPPEAKKPQFEAVNNSMSELGASVGNSYMCNAEETLLVTQGAFVNLFS
VQVQVFKIDGDKFGAVEECQLDENNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQT
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcccggccccgcgttcccgtgctcctggccgctgctgccgcgctgctcggttttcta
cagacttccttctcatttgaagtgaaagagagtggtaaaatctgcataactgctgatctg
ttggtaaacttctcagtggaataccctgccaagggtcaccaagagatggcaaattttgca
cttccacaaactggtactgtactactgcacaacagcacttgtggtaaaggggatgcacct
actccagttctcgtgattggatttggaatgggacagtccttaagcctgaaattcatgaag
acctcaaaccagtacagagttgaagagttaaccttcagttacaatttgtctgatgcagct
ttcttccccagtgcctcagctggaggaacaatggaagtatcacaaaaaactgatattcag
gccaacttgggtacaagataccaatgcatcagtacagaccaggtcaatatgaagaatgtc
aatgttactcttagcaatgttacgcttgaagcatatcttgtgaataataccttaagtgta
aatgaatatgaatgtaccagagataaaccgatgactaccattgctactacaactgccagg
cagactactagccaggtgcctaccactactagtccagcaccaaccacactgccgcaaaac
ccagcggttggtaaatacaatgtgactggtaaaaacgggacctgtgtacttgcttctatg
gggctgcagcttaatgtatcctatgaaagcaaagacggaaagactggattagatgtgctg
aatttcatcccatctaatacatctttctctggaaactgtgacaattcctcagccttcttg
aacttgacttttgggaaagccaagctcatcttccacttcgttcggaacacaagtattgag
aagtttttcctgcaaggtgtcaccgtgagcacaactttgcctcctgaagccaaaaaacca
cagtttgaggctgtgaacaacagcatgagtgagcttggtgcttcggtgggaaattcctat
atgtgtaatgcagaggagactctcttggtcacacaaggagcttttgtcaacctgttcagc
gttcaggtccaggttttcaagattgatggagacaaatttggggcagtggaagaatgccag
ctggatgaaaacaacatgttgatccctatcatagtaggtgcagctcttgctggacttgtc
ctgatagtcttgattgcttatttgattggcagaaagagaagccatgctggatatcagaca
atttaa

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