KEGG   Alligator sinensis (Chinese alligator): 102372181
Entry
102372181         CDS       T02922                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asn04121]
    102372181 (HLTF)
   03400 DNA repair and recombination proteins [BR:asn03400]
    102372181 (HLTF)
Enzymes [BR:asn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102372181 (HLTF)
Ubiquitin system [BR:asn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102372181 (HLTF)
DNA repair and recombination proteins [BR:asn03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102372181 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_UBOX zf-RING_5 zf-RING_2 zf-ANAPC11 ResIII RING_XB3-XBAT31 HDA2-3 zf-C3HC4_4 zf-rbx1 zf-RING_6 Prok-RING_4 zf-Nse
Other DBs
NCBI-GeneID: 102372181
NCBI-ProteinID: XP_014379825
UniProt: A0A1U8DRE8
LinkDB
Position
Unknown
AA seq 984 aa
MFAKNYGSSTGYGGNRTYSCSSSGDVDSALGFEDFLYTDDTSGTDEDLDLFVLFGNLRGS
VVGLRYYTGVVNNNEMVALQREPNNPYDKNAVKVNNVNGDQVGHIKKELAVPLAYIIDNK
LARVEGIVPYGAKNTFTMPVQMSFWGKEENKQAVLDRLKMHGFKMAPPLKSSELGFGSNL
FSGRAGPSYSAPGHTAVQMTTEQLKSEFDKLFEDLKEDDKTREIQGPEVIGTQLLPHQKQ
ALAWMVLRENNKELPPFWEERNSFFYNTLTNFAEKERPENVLGGILADDMGLGKTLTTIA
LILANFHNGKPLPVEKIKRDQLYKEFGATSVKNEGDLPFKDLNXXXXKSETVQSQLSSSY
PKRTKAKKPKYSESSDSEESEEWLPQETRINTKKDLPTTRKRSKASCNFQEDTGFASALA
APSPTLKKKAKKKGTSSIQLAKKDDSEEGQRTTLIICPLSVLSNWIDQLEQHISPDVHLN
VYVYYGPDRSKDPALLSRQDIVLTTYNILASDYGSRGDSPLHKLKWLRVVLDEGHTIRNP
NALQTKAALNLEAQRRWILTGTPIQNSLKDLWSLLSFLKLKPFADREWWHRTIQRPVMMG
DQAGLRRLQSLIKNITLRRTKMSKIKGKPVLELPERKVFIQHVTLTEEERQIYQAVKNEG
KLAISRYFSEGTVLAHYADVLGVLLRLRQLCCHPHLCTNASSFSGTGVNNTPEELREKLV
NKMKLVLSSGSDEECAVCLDSLTFPVITHCAHVFCKPCICEVIQSEQPNAKCPLCRNELR
LEHLIECPLEESDFESVKKNDREWIPSSKINALMHALIELRKENPVVKCLIVSQFTTFLS
LIETPLRESGFVFTRLDGSMPQKKRVEAIQCFQSSQAGSPTIMLLSLKAGGVGLNLTAAS
RVFLMDPAWNPAAEDQCFDRCHRLGQKQAVVITKFVVKNSVEENMLSIQNKKRKLAAGAF
ATKKPTASEVKQTKINEIKTLIDL
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgttcgccaaaaactatggttcatctacaggctatggaggaaataggacttattcctgt
tcttcttctggtgatgttgattctgctcttgggtttgaagactttctgtatacagatgac
acttcagggacagatgaggatttagatttgtttgtcctgtttggaaatctgcgaggaagt
gtagttggattacgctactacacaggagttgttaacaataatgaaatggttgcacttcag
agggagcctaataacccttatgataaaaatgcagtaaaagtaaataatgtgaatggagac
caggtaggacacattaaaaaagaactggcagtacccttggcatacatcattgacaataaa
ctagcaagagtagaagggattgtcccttatggagcaaaaaatacctttactatgcccgta
caaatgagtttttggggaaaagaagaaaataagcaagctgttctagatcgactgaaaatg
catggctttaaaatggctcctcctctaaaaagttcagaacttggctttggatcaaacttg
ttttctggaagagctggcccaagctatagtgctccaggtcatactgctgtgcagatgaca
acggaacagcttaaaagcgagtttgacaagctatttgaagatttgaaagaagatgataaa
acgcgtgaaatccagggaccagaggttattggaacacagttacttccacaccagaaacaa
gctttagcttggatggttttgcgtgagaacaataaggagctgccaccattttgggaagaa
agaaacagcttcttttataatacacttacaaattttgctgaaaaggaaagaccagaaaat
gttcttggaggaatactggctgatgatatgggtttgggcaaaactctcacaaccattgcc
ctgattctcgccaactttcacaatggcaaacctcttcctgttgaaaagatcaaacgtgat
caattgtataaggaatttggtgcaactagcgtgaaaaatgaaggggacctacctttcaaa
gatctcaactgnnnnnnnnnnaagagtgaaactgttcagtcacaactgtccagttcttat
ccaaaaagaacaaaagccaagaaacccaagtattcagaaagcagtgattcggaagaatca
gaagagtggctaccacaagaaacaagaatcaacactaaaaaggatctccctacaaccagg
aaaagaagtaaagcttcttgtaattttcaagaagatacaggctttgcatctgcccttgca
gctccatctcctacattaaaaaagaaagcaaagaaaaaaggtacttctagcattcagttg
gctaagaaagatgattctgaagaaggacaaagaacaacactaatcatatgtccgctgtct
gttttaagcaactggatcgaccagcttgaacaacatatcagccctgatgttcacttaaac
gtttatgtttattatggacctgaccgcagcaaagacccagcacttctttcaagacaagac
attgtactgacaacctacaacattttagccagtgattatggaagcagaggtgatagtccg
ttacacaaactcaaatggctcagagtggtattggatgaggggcacacgatacgaaatcca
aatgctctacaaactaaagctgcattaaatctggaggcacagagaagatggatactgaca
ggcactcctatccagaattccttaaaggatttgtggtcacttctctcctttctaaaactg
aaaccatttgctgatcgagagtggtggcatagaacaattcagcgccctgttatgatggga
gatcaagcggggcttaggcgtttacagtccctaattaaaaatattactcttagaagaact
aaaatgagcaaaattaaagggaagccagttttggagttgccagaacgtaaagtatttatt
cagcatgttacacttacagaggaagagagacaaatctatcaggctgtgaagaatgagggc
aaacttgctattagcagatatttcagtgaaggaactgttctggcacattatgcagatgtc
cttggtgtgttattgagactgagacagctgtgttgtcatcctcacctttgtacaaacgca
tcttctttcagtggtacaggtgtaaataatactcctgaagaattgcgtgagaaactagta
aataaaatgaagctggttctgagctctggatcagatgaagaatgtgcagtttgcttggat
tctctcacctttcctgtgataacacattgtgcacatgtgttttgtaaaccgtgtatatgc
gaagtcatccaaagtgaacagccaaatgccaaatgccctctttgtaggaacgaacttcga
ctagagcatttgatagaatgtcctctggaggagtcggactttgagagcgtgaagaaaaat
gatcgggaatggatacccagttcaaaaataaatgctttaatgcatgctttgatagaacta
aggaaggagaatccagtggttaagtgtctgattgtttctcaattcacaactttcctgtct
ttaatagaaacaccgctgagagagtctggctttgtttttactcgtttggatgggtccatg
ccccagaaaaaacgggtagaagcaattcagtgcttccaaagcagccaagcaggatctcca
accataatgctgttatcactaaaagctggtggggttggactaaacttgacagcagcttca
cgagtgttcctaatggatccggcttggaatcctgcagcagaagaccagtgttttgacaga
tgtcacagacttggccagaagcaagctgttgttatcaccaagtttgttgtgaagaattca
gtggaagaaaatatgctgagcatccaaaacaagaagaggaaactggctgcaggagccttt
gcaactaaaaagcctactgctagtgaagtgaaacaaaccaaaattaatgaaattaagact
ctaattgacttataa

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