Alligator sinensis (Chinese alligator): 102372492
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Entry
102372492 CDS
T02922
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
asn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102372492
03015 mRNA surveillance pathway
102372492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102372492
Enzymes [BR:
asn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102372492
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102372492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102372492
NCBI-ProteinID:
XP_014379071
UniProt:
A0A1U8DFI3
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MCSPLVPSRDYLGFAIAGQDWQLSNLHLKEEKTKPDSNGAVVKADDNAEKTEDEEKEDRA
AQSLLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSK
IQEFKMTVVCXSSPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQ
TGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIK
VFVLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKL
KREEETLDTIKQYYVMCNNRDEKFQALCNIYGAITIAQAMIFCHTRKTAAWLAAELSKEG
HQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGN
PDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKIEKLDTDDLDEIEKI
AN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcgccactcgtcccttcacgcgactatctagggtttgctattgccggtcaagac
tggcagttgagcaacctgcacctgaaggaggagaaaaccaaaccagattccaatggtgct
gttgtcaaagcagatgacaatgcagagaaaacagaggatgaggaaaaagaggacagagcc
gcccagtccttgttaaacaagcttatccgcagtaacctggttgacacaacaaaccaagtg
gaggtactgcagagagatcccacgtcacctctctactcagtgaagtcttttgaggagctg
cgactgaaaccccaactcctgcaaggagtttatgccatgggcttcaaccgaccatcaaaa
atacaggagtttaaaatgactgttgtgtgttgatccagcccacagaacctgattgcccag
tctcagtctggtactggtaagacagctgcctttgtcttggccatgctcagcagagttgaa
cctgggaacaagtacccacagtgtttgtgcctttccccaacatatgagctggcacttcaa
acaggaaaagtgattgaacagatgggaaagttttatccagagctgaaacttgcatatgct
gtccgaggcaataaattggagagaggtcagaagatctctgagcagattgtaattggcact
cctggcactgtactggactggtgctccaagctgaaattcatagaccccaagaagatcaaa
gtgtttgttttagatgaagcagatgtgatgatagcaacccagggtcatcaagaccagagc
attcgcattcagagaatgctccccagagattgtcagatgcttctattttctgccactttt
gaggattcggtgtggaaatttgctcagaaagttgttcctgacccaaacatcatcaaactg
aagcgagaagaggagacgctggacaccattaagcaatactacgttatgtgtaacaaccga
gatgagaagttccaggctctctgtaatatctatggagccatcaccatcgcgcaggccatg
attttctgtcatactcgtaaaacagctgcctggctggcagcagagctgtcaaaagaaggt
caccaggtggcattgctaagcggcgagatgatggtggaacaaagagccgcagttatagaa
cgtttccgagagggcaaagagaaagtgctggtgacaacaaacgtctgtgccagagggatt
gatgtggaacaagtgtctgttgttatcaactttgatcttcctgtggataaagatggaaat
ccagataatgagacatatctgcatcggattggtcgtacaggtcgttttggcaaacgagga
ctcgctattaacatggtagacagcaagcacagcatgaatatcctcaacaggatccaagaa
catttcaacaaaaagatagaaaaattggataccgacgacttggatgaaatagagaaaata
gccaactga
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