Alligator sinensis (Chinese alligator): 102372507
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Entry
102372507 CDS
T02922
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102372507 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asn03400
]
102372507 (MSH2)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102372507 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
DNApol3-delta_C
Motif
Other DBs
NCBI-GeneID:
102372507
NCBI-ProteinID:
XP_025061757
UniProt:
A0A3Q0GQS9
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
WGNVSSCKGNGITSFGEQAFVVLHRFFSRNQKLESVVLSKMNFESFVRDLLLVCHYRVEV
YKNRAGSKSTKENDWYLAYKGSPGNLAQFEEILFGNNDMSTAIGVVGVKLSAAEGQRIIG
VGYVDTTLRKLGVCEFPDNDQFSNLEALLVQIGPKECVFPGGETVGDMGKVRQIIQRGGI
LITDRKKAEFTTKDIVQDLNRLLKSKKEEQVTSAALPEMEKQVAISSLSAVIKYLELLSD
ESNFGQFELTTFDLSQYMILDNAAVRALNLFQGSSENANSTQSLVGLLNKCRTPQGQRLV
SQWIKQPLMDKNRIEERLNLVETFVVDTELRQSLQEDLLRRFPDLNRLAKKFQRQAATLQ
DCYRMYQAINQLPNVVQALEKHEGVHQMLLLTVFITPLHDIYSDFSKFQEMIETTLDMSK
VENHEFLVKPSFDPNLTELREKMNEIEESMQSCLKTAARELGLEASKSIKLESSSQLGHH
FRITCKEEKVLRNNAKYKILDTQKNGVKFTNSKLSSFNEEYLKYKEEYEEAQDAIVKEII
NIASGYAEPIQTMNDVIAQLDAVVSFAHVSSGAPVPYVRPVILEKGQGRIVLKGSRHPCV
EVQDDVAFIPNDVTFEKGKQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEV
TIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGL
AWAISEYIASKIDAFCMFATHFHELTALAGQVPTVSNLHVTALTADDTLTMLYRVKKGVC
DQSFGIHVAELVAFPKHVIESAKEKALELEEFQNIGEPEESEGEPAVKRCYREKQEGEKI
IQDFVYQVKALPLTDMSEEDIKTKLKQLKAEVLAKNNSFVNEVIARTEATS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
tggggaaatgtctcatcatgcaaagggaatggcattacttccttcggtgaacaggctttt
gtggtgttacacaggtttttctcaaggaatcagaaacttgagagtgttgtacttagtaaa
atgaactttgaatcgtttgtcagagatcttcttttggtttgtcactacagagttgaagtt
tataagaatagggctggcagcaaatctaccaaagagaatgactggtatttggcatacaag
ggctccccgggtaaccttgcccagtttgaggaaattctgtttggtaataatgacatgtca
actgccattggagttgtgggtgtgaagttgtccgctgctgaggggcaaagaataattgga
gttgggtatgttgacacaacactgagaaagctgggtgtctgcgagtttccggataacgac
cagttctcaaacctggaagctttgctagttcagattggtcccaaggaatgtgtgtttcca
ggaggagagacagtcggagacatgggaaaagtgcgacagatcattcagagaggaggaatc
ctgattactgatagaaaaaaggctgaattcacaacaaaagatattgttcaagaccttaat
cgcttactgaaatcaaagaaggaagaacaggtgactagtgcagcattgccagagatggaa
aagcaggttgccatttcatccctgtcggctgttatcaagtatttggagctgttgtcagat
gaatccaactttggacaatttgagctgactactttcgacctcagccaatatatgatactg
gataatgcagctgtccgagcccttaacctttttcagggttcctctgaaaatgccaacagt
acacagtctttggttgggttgttaaataaatgcagaactcctcaaggacaacgactggtc
agtcagtggatcaagcagccacttatggacaagaacagaatagaagaaaggttaaatttg
gtggagacctttgtggtagacacagagctacggcagtcccttcaagaagaccttctgcgt
cgttttccagacctcaatcggctagcaaagaaatttcagagacaagctgcaaccttgcaa
gattgttaccgaatgtatcaagctattaaccagctgcctaatgttgttcaggcactggaa
aaacatgaaggagtgcaccagatgttgttgttgacagtgtttataacacctcttcatgat
atctactctgatttctccaagtttcaggaaatgatagaaacaactttagacatgagtaag
gtggaaaaccatgaattccttgtaaagccttcttttgatcctaacctgacagagttgaga
gagaagatgaacgaaatagaggagtccatgcaatcttgtcttaagacagcagctagagag
ctagggttggaggctagcaagagcatcaaactggagtccagttcacagttagggcatcac
ttccgaatcacctgcaaagaagagaaagtcctccggaacaatgcaaaatataaaatctta
gacacccagaagaatggtgtgaaattcactaacagtaaattgagctccttcaacgaagaa
tacttaaaatacaaagaggagtatgaagaggcccaggatgccattgttaaagaaatcatc
aacattgcttcaggttatgcagagccaatacagacaatgaatgatgtgatagctcagtta
gatgctgttgtcagttttgctcatgtatcaagtggagcccctgtgccatacgtccgccca
gtcattttggagaagggacaaggacggattgtgttgaaaggttccagacacccttgtgtt
gaagtgcaagatgatgtagcattcattcccaatgatgtcacctttgagaagggcaagcag
acgtttcatattattactggccctaatatgggagggaaatctacatacattcgccagact
ggagtgatagttcttatggcccaaattggatgctttgtaccgtgtgactcggcagaagtg
actattgtggattgtatcctggctcgcgtaggtgcaggagacagtcaattaaaaggagtc
tctactttcatggcagagatgttagaaactgcttcaattcttaggactgccacagaaaat
tctctgataatcattgatgagttgggaagaggaacttcaacatatgatggatttgggctg
gcctgggcaatttcagaatacattgcaagcaaaattgatgccttctgcatgtttgccaca
cattttcatgaactgacagcacttgcgggccaagtgccaactgtcagtaatctgcatgtc
acagcacttactgctgacgacacactgactatgctttaccgtgtcaaaaaaggtgtttgt
gaccagagctttgggatacatgtagcagagcttgttgcttttccaaaacatgtaatagag
agtgcaaaagagaaagctctggagctggaggagttccaaaacattggagagcccgaggaa
tctgaaggagagccagcagtgaagagatgctaccgagaaaaacaggaaggtgaaaaaata
attcaggactttgtttatcaagtgaaagcattgccgttgacagacatgtctgaggaagac
atcaaaaccaaactgaaacaactgaaagctgaagtgctggcaaagaataacagttttgta
aatgaagttattgcccgaacagaagccacttcatga
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