Alligator sinensis (Chinese alligator): 102373217
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Entry
102373217 CDS
T02922
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102373217 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asn03021
]
102373217 (TAF5)
03036 Chromosome and associated proteins [BR:
asn03036
]
102373217 (TAF5)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102373217 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
102373217 (TAF5)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102373217 (TAF5)
STAGA complex
102373217 (TAF5)
TFTC complex
102373217 (TAF5)
SAGA complex
102373217 (TAF5)
SLIK complex
102373217 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
Cytochrom_D1
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
102373217
NCBI-ProteinID:
XP_025057001
UniProt:
A0A3Q0GBG0
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
AAGPTGPALPSASPAAAAPPAKVGVIAVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHF
IECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFEKFHGDQECYYQDDLRVLSS
LTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDG
MPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKK
PKKDSVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKAMNIKEATKRVRLGPDCLPSICFY
TFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVL
ERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH
NYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRMFAGHLADVTCSRFHPNSNYIAT
GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMV
GELKGHTDTIYALRFSRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPEN
SQDLLLGTYMSKSTPVIHLHFTRRNLLLAAGAYSPQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gccgccggccccaccggcccggctctcccgtccgccagccccgccgccgccgcgccaccc
gccaaagtcggagttatcgccgtcgaagaccagccggacgtgagcgcggtgttgtccgcc
tacaaccaacaaggtgacccagcgctgtacgaggaatactacagcggactgaaacacttc
atcgagtgctccctagactgtcaccgggccgaattatcccagctgttttatccgcttttt
gtgcacatgtatttggagttggtctacaatcaacatgagagtgaagcaaagtctttcttt
gagaagtttcatggagatcaggagtgttattaccaggatgacctgcgtgtattatccagc
ttaaccaaaaaggaacacatgaaagggaacgagaccatgctggatttccgaacaagcaaa
tttgtgctgcgcatttcccgtgactcttaccagctcttgaagagacacctgcaggaaaag
cagaacaatcagatctggaacattgttcaggagcatctctacatcgacatctttgatgga
atgccccgcagcaaacagcagatagatgctatggtgggaagcttggctggagaggcaaaa
cgagaggcaaataaagcaaaggttttctttggcttattgaaagagccagaaattgaagtc
cctttggatgatgaagacgaagaaggggagaacgaggaaggaaaaccaaaaaagaaaaaa
ccgaaaaaagatagcgtgggatcaaaaagtaaaaaacaagacccgaatgctcctccgcag
aacagaattcctcttcctgaactgaaagactctgacaagctggataaagcaatgaacata
aaggaagccacaaagcgtgtgcgtcttggcccagactgcttgccttctatctgtttctac
acattccttaatgcttaccagggtcttactgcagtggatatcacagatgactctagcatg
attgtaggaggctttgctgactccactgtcagagtgtggtctgtgacaccaaaaaagcta
cgcagtgtaaaaacagcagcagatctcagtctcatagacaaagaatcagatgatgtcttg
gaaaggatcatggatgagaagacggcaagtgagctgaagattttatatggtcacagtgga
cccgtctatggtaccagcttcagtcctgataggaactacctgttatcctcctcagaagat
ggcactgtgcgattgtggagtctgcaaacatttacttgcctggtgggatataaaggacac
aactatccagtatgggatacgcagttctctccctatgggtattactttgtatctggtgga
catgacagagtggctcggctctgggcaacggatcactatcagcctttgcgtatgtttgct
ggccatcttgctgatgtcacatgtagtcggtttcatcccaactccaactatattgctacg
ggctcagcagacagaactgtgcgactctgggatgttctgaatgggaactgtgtgaggatc
ttcactggacataagggaccaattcattcgctggcattttcccctaacggaagattcctg
gccactggagcaacagatggaagagtgctcctctgggatattggccatggtttgatggtg
ggagagttgaaagggcacactgacaccatctatgcactcagattcagtagagatggggag
attttagcatcaggttctatggataacacagtcaaactgtgggacgctgtgaaagcattt
gaagacttggaaactgatgattttacaacagccacaggacacataaatctgcctgaaaac
tcacaggacttgctactgggtacttacatgagcaaatcaaccccagtcatacaccttcat
tttacacggagaaacttgctgctggctgccggagcgtacagcccacaataa
DBGET
integrated database retrieval system
