Alligator sinensis (Chinese alligator): 102373279
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Entry
102373279 CDS
T02922
Symbol
LRFN1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asn04515
]
102373279 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
asn04990
]
102373279 (LRFN1)
Cell adhesion molecules [BR:
asn04515
]
Immunoglobulin superfamily
SALM family
102373279 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
asn04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102373279 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
LRR_9
Ig_2
fn3
ig
LRR_14
Sp38
C2-set_3
Fndc10
Ig_DSCAM-DSCAML_C
C2-set_2
DHU1_N
Motif
Other DBs
NCBI-GeneID:
102373279
NCBI-ProteinID:
XP_025049183
UniProt:
A0A3Q0FTZ5
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MGAYVDGPNPGWDDLGCSEALILAXGHLGWATPGPRPPAPQVNRPPLVSPCRAPGGRTGT
MARLPLPLPLPLLLLLGAPAGARAQHCPGRCICQHVAPTLTMLCAKTGLLFVPPAIDRRT
VELRLTDNFITVLRRKDFANMTSLVHLTLSRNTISQILPHAFADLRALRALHMNSNRLAA
VRRDHFRGLANLRHLILGNNQIRRIEPGAFDDFLGTVEDLDLSYNNLDTLPWAAVGQMTS
LNTLTLDHNLIEHIAEGTFAQLHKLVRLDMTSNRLQKLPPDSLFLRAQVQADARGAAHPG
TLTVSFGGNPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIPEEEFMCEAPLITR
QYASRAFIVEGQGVSLKCKAVGDPEPSIHWIGPDGKLVHNSSRATVYDNGTLDVHITTLK
DDGAFTCIASNAAGEATAAVEVAIVPLPLLVNHTGQGREPDPGSSDITTSAKSGANESKV
PADRRIVAAELTSSSALIRWPSERHIPGIRMYQIQYNSSLDXSPPSRMIPSSSRTFLVND
LAAGRAYDLCVLAVYDDGVTALTATRVVGCVQFTMEGEAARCRALHTQFLGGTMIIIIGG
IIVASVLVFIIILMIRYKVQGAHDAAPAAKVSSVCSQTNGGAPAPXXXXPAAEVPGGAQG
AVRRELARTHPHRHSFDGDYALFQSHSYPRRARTKRHMSTSQLDARDSPLGPRRVLFSST
EWMLESTV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcttatgtggatggtcccaatcctggctgggatgatctgggctgcagtgaggcc
ctgatcctggcctgagggcatctgggctgggccacaccagggccccgacccccagcgccc
caggtcaaccgccctcccctggtctctccctgcagggccccagggggccggacggggacc
atggcccggctgccgctgcccctgcccctgcccctgctgctgctgctgggggcgccggcg
ggggccagggcgcagcactgccccgggcgctgcatctgccagcacgtggcacccacgctg
accatgctgtgcgccaagacggggctgctgttcgtgccgcccgccatcgaccggcgcacg
gtggagctgcggctgacggacaacttcatcacggtgctgcggcgcaaggacttcgccaac
atgaccagcctggtgcaccttaccctgtcccgcaacaccatcagccagatcctgccgcac
gccttcgccgacctccgcgccctgcgcgccttgcacatgaacagcaaccgcctggcggcc
gtgcgccgcgaccacttcaggggcctggccaacctgcgccacctcatcctgggcaacaac
cagatccgccgcatcgagccgggtgccttcgacgacttcctgggcaccgtggaggacctg
gacctgtcctacaacaacctggacacgctgccctgggcggcggtagggcagatgaccagc
ctcaacacgctgacgctggaccacaacctcatcgagcacatcgccgagggcaccttcgcc
cagctccacaagctggtgcggctggacatgacgtccaaccggctgcagaagctgcccccc
gacagcctcttcctccgggcccaggtccaagccgatgcccggggggcggctcacccgggc
acgctgaccgtcagcttcgggggcaacccgctgcattgcaactgcgagctgctgtggctg
cggcgcctgacgcgggaggacgacctggagacgtgcgcgtcccccgagcacctcatggac
aagtatttctggagcatccccgaggaggagttcatgtgcgaggcgccgctcatcacgcgc
cagtacgccagccgggccttcatcgtggagggccaaggcgtgtcgctcaagtgtaaggcc
gtgggcgacccggagccctccatccactggatcgggcccgatgggaagctggtgcacaac
agctctcgcgccaccgtgtacgacaacgggaccctggacgtccacatcaccacgctcaag
gacgacggggccttcacctgcatcgcctccaacgcggccggcgaggccacggccgccgtg
gaggtggccattgtgcccctgcccctgctggtgaaccacacggggcagggccgggagccc
gaccccggctcctctgacatcaccacctcggccaagtcgggcgccaacgagagcaaggtg
ccggccgaccggcgcatcgtggcggccgagctgacgtccagctccgccctcatccgctgg
ccctcggagcgccacatccccgggatccgcatgtaccagatccagtacaacagctccctc
gacntctccccaccctccaggatgatcccgtcgtccagccgcaccttcctggtgaacgac
ctggcggcggggcgggcctacgacctgtgcgtgctggccgtgtacgacgacggcgtgacg
gcgctgacggccacgcgggtggtgggctgcgtgcagttcaccatggagggcgaggcggcc
cggtgccgggcgctgcacacgcagttcctgggcggcaccatgatcatcatcatcggcggc
atcatcgtggcctcggtcctcgtcttcatcatcatcctcatgatccgctacaaggtgcag
ggcgcccacgacgctgcccccgccgccaaggtcagcagcgtctgctcccagaccaacggg
ggggccccggcccccnnnnnnnnnnagcccgccgcggaggtgcccgggggggcacagggg
gccgtgcggcgggagctggcgaggactcacccccaccggcactccttcgacggggactat
gccctgttccagagccacagctacccccggcgggcacggacaaagcgccacatgtccacg
tcccagctggacgcccgggactcccccctgggcccacgccgggtcctttttagtagcacc
gagtggatgttggaaagcaccgtctga
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