Alligator sinensis (Chinese alligator): 102373885
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Entry
102373885 CDS
T02922
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
asn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102373885 (UPF2)
03015 mRNA surveillance pathway
102373885 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102373885 (UPF2)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102373885 (UPF2)
mRNA cycle factors
P-body specific factors
102373885 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
102373885
NCBI-ProteinID:
XP_006022206
UniProt:
A0A1U7RLH8
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MPAERKKPANMEEKESSLNNKDKDFSERRPVSSREKPKDDVKVGMKREALKTSEDKKKKL
EEDKRKKEDKERKKKEDDKIKAEEEQKRKEEEEKKLEEEEKKKQEEEVKRQQEEAAAQLK
EKEEAHQLHQEAWERHQARKELRSKNQSAPDSRPEENFFSRLDSSLKKNTAFVKKLKTIT
EQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQ
AWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESH
THVSVVISFCRHCGDDIAGLVPRKVKNAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTS
LTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDE
NMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAIL
FKDNEKYSQSKDPSKEESRESKDAKDNKEVSGTEDLELELENMDINDDPLELDCGDEAED
LTKKLLDEQGKREAADSTGAANSDGKQAERKQEDEEASTGSHLKLIVDAFLQQLPNCVNR
DLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLC
SMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIE
MACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPLAE
KTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKDYVICCMINIWNVKY
NSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNY
RMVESAVIFRTLYSFTSFGVNPDGSSSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRK
LDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCSSLEEAVRQVQ
DLEREFLIKLGLVNDKDSKESMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGS
DNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMM
LENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGSGEGDSESGDTMPFVMLTRKGNKQ
QFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAP
ANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatcttcattaaataac
aaagataaagacttcagtgaaaggcgaccagtgagcagtagagagaaaccaaaagatgat
gtcaaggttggcatgaagagagaggccctaaagacatctgaagataaaaagaaaaaactg
gaagaggataaaaggaaaaaagaagacaaggagcgaaagaaaaaggaggacgacaaaata
aaagctgaggaggaacagaaaaggaaggaggaggaagaaaaaaagcttgaagaggaagag
aaaaagaaacaagaagaggaagtaaaacggcagcaagaggaggcagctgctcagctgaaa
gaaaaagaggaagcacatcagctccatcaggaggcttgggaacgccatcaagcaagaaag
gaactccgcagcaaaaaccagagtgcaccagacagccgccctgaggaaaatttctttagc
agattggactcaagtctgaagaagaacacagcttttgttaagaagctaaaaactatcaca
gagcaacagagagactccttgtcccatgattttaatagcctcaatttaagcaagtacatt
gcagaagctgtagcttctattgtggaagcaaagctcaaaatatcagatgtgaactgtgct
gtgcacttgtgttctctatttcaccagcgctatgctgattttgctccctcattacttcag
gcctggaaaaagcattttgaagcaaggaaagaggagaaaactcccaacattaccaaacta
agaactgacttacgtttcattgcagaattgacaatagttgggattttcactgacaaggaa
ggtctgtctttaatttatgaacagctaaaaaacattattaacgctgatcgagaatcccac
actcatgtttctgtggttataagcttttgccggcattgtggtgatgacattgctggcttg
gtaccaaggaaggttaaaaatgctgcagagaagtttaacctgagttttcctcctagtgag
ataatcagcccagagaaacaacagcctttccagaatttgttgaaggaatattttacatca
ttgaccaaacacctgaaaagggaccacagggagctacaaaatattgagagacaaaacagg
cgtattctgcattctaaaggagagttgagtgaagatcgacacaagcagtatgaagaattt
gcaatgtcctatcagaagttgttggcaaactctcagtctctagctgatctgttggatgaa
aatatgcctgatcttccccaagataaaccaacaccagaggagcatggccctggcattgac
atttttaccccaggcaaaccaggagaatatgacctggaagggggcatctgggaagatgaa
gatgcacgaaatttctacgagaaccttattgatctgaaagcttttgtgccagccatcttg
tttaaagataatgaaaaatattctcagagcaaggatcccagtaaggaggaatctagagag
tccaaagatgccaaagataataaagaagtgtctggtactgaagatttggaattggagctg
gagaacatggacattaatgatgatccgcttgagttagactgcggagatgaggcagaagat
ctaacaaagaagcttcttgatgaacaaggcaagagagaggcagccgatagcaccggagct
gcaaatagtgacgggaaacaagctgaaagaaaacaagaggatgaagaggccagtactggg
tcccacttaaaacttatagtagatgctttccttcagcaactcccaaactgtgtcaacaga
gacctcatagacaaggcagccatggatttttgcatgaacatgaacacaaaggccaacaga
agaaagttagtacgagcactcttcatagttcctagacaaaggttggatttgctaccgttt
tatgcaaggctggttgccacgttgcatccctgtatgtctgatgtggcagaggatctttgt
tccatgctgaaaggggatttcagatttcatgtgagaaaaaaggaccagatcaatattgag
acaaagaataaaactgtgagatttattggagagcttacgaagtttaagatgttctccaaa
aatgacaccctgcattgtttaaagatgcttctgtccgacttttctcaccaccatattgaa
atggcatgcacactgctggaaacctgtggaagattcctttttcgatcaccggaatcgcac
ttaagaaccagcgttcttttggaacaaatgatgagaaagaaacaggcaatgcatcttgat
gcacgatatgttacaatggtggagaatgcttactactactgtaatccccctctggctgaa
aaaactgtgaaaaagaaacgcccacctttgcaggagtatattcgtaagcttctctacaag
gatctttccaaggtcaccactgagaaggtcctgagacaaatgcgcaagctgccctggcag
gacccggaagtgaaagactatgttatatgttgcatgatcaacatttggaatgtgaaatat
aatagtattcactgtgtagccaacctcttagcagggttggtactttaccaagaggatgtt
ggcattcatgtggtggatggagtactagaagatattcgactaggaatggaggttaaccag
cccaagtttaaccagcggcggatcagcagtgccaagttcctgggggaactttacaattac
cgaatggtagagtcagctgtaatatttcgaactctgtattcatttacatcatttggtgtg
aaccctgatggtagttctagtccactggaccctccagaacaccttttccgaattagactc
gtttgcaccatacttgatacctgtgggcagtattttgacaggggttccagcaaacggaaa
cttgactgcttccttgtctattttcagagatacgtttggtggaagaaaagtttggatgtt
tggacaaaagatcatccctttcctattgacattgattatatgatcagtgatacactagaa
ctcctgagaccaaagataaagctctgcagttctctggaagaagctgtcaggcaggtacaa
gacttggaacgagaattcttaataaaactaggccttgtgaatgacaaagattcaaaagag
tctatgactgagggtgagaatctggaagaggatgaagaagaggaggaaggtggagcagag
acagaagaacaatctggaaatgaaagtgaagtaaatgagccagaggaagaggagggctca
gacaatgaggaagaggaaggtgaagaagaggaggaagagaatacagattacctcacagac
tctaataaagaaaatgaaacggatgaagagaatacagaagtaatgattaaaggaggggga
cttaagcatgtcccttgcgcagaggatgaagacttcatccaggctttagataaaatgatg
ctggaaaatcttcagcaacggagtggagagtctgtgaaagtgcatcagctggatgttgct
attcctctgcatctcaagagccagctaaagaagggtccaccactaggtagtggggaagga
gattcagagtctggagacactatgccttttgtcatgctaactcgaaaaggcaacaagcag
cagtttaagatcttaaatgtgccgatgtcttcccaacttgctgcaaaccattggaaccaa
caacaagctgagcaggaggagagaatgagaatgaaaaagctcaccttggatatcaatgag
cgacaagagcaagaggactatcaggaaatgttacagtctctggcacagcgcccagctcca
gcaaatactaatcgtgaacggcggcctcgttaccaacatccaaagggagcgcctaatgca
gatctaatctttaaaactggtgggaggagacgttga
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integrated database retrieval system
