Alligator sinensis (Chinese alligator): 102373949
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Entry
102373949 CDS
T02922
Symbol
LSM2
Name
(RefSeq) LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03018
RNA degradation
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102373949 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
102373949 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102373949 (LSM2)
03041 Spliceosome [BR:
asn03041
]
102373949 (LSM2)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102373949 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
102373949 (LSM2)
Spliceosome [BR:
asn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102373949 (LSM2)
Complex C
U2 snRNP components
102373949 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
102373949
NCBI-ProteinID:
XP_006037707
UniProt:
A0A1U7SL22
LinkDB
All DBs
Position
Unknown
AA seq
178 aa
AA seq
DB search
MALNAAPGSLPRRLCLLSRPLGHGLPREPRGSGRRAATESRASVRAGRGYKKLLLPPMCP
ACACAGRGFRSERCRLVSLGPVAMLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLN
IKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaacgcggcccctggctcccttccgcgccggctctgcctcctctcgcggccg
ctgggccacggccttccccgggagccgcggggctcgggacgccgagcggcaacagaaagc
cgcgcttccgtccgggcggggcggggctacaagaagctcctccttccccccatgtgccct
gcatgcgcatgcgcagggcgcgggttccggtccgagcgctgccggctcgtgtccctgggt
cccgtcgcgatgcttttctactctttcttcaagtccctggtgggcaaagatgtggtggtg
gagctgaaaaatgacctcagcatttgtgggacactccactccgtagaccagtacctgaac
atcaagctgacagacatcagtgtgacagaccctgagaagtacccacacatgctgtcagtg
aagaactgcttcatccggggctcagtggtccgctacgtgcagctgccagccgacgaggtg
gacacacagctgctgcaggatgctgcgcgcaaggaggcactgcagcagaagcagtga
DBGET
integrated database retrieval system
