Alligator sinensis (Chinese alligator): 102373968
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Entry
102373968 CDS
T02922
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102373968 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102373968 (ARID1A)
03021 Transcription machinery [BR:
asn03021
]
102373968 (ARID1A)
03036 Chromosome and associated proteins [BR:
asn03036
]
102373968 (ARID1A)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Helix-turn-helix
ARID
102373968 (ARID1A)
Transcription machinery [BR:
asn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102373968 (ARID1A)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102373968 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102373968
NCBI-ProteinID:
XP_006019311
UniProt:
A0A1U7R8T2
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MDQMGKMRPQPYGGSNPYAQQQGPQSGPQQGHGYPGQPYGPQTPQRYPMAMQGRTQSAMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQGPHSQQQQPPYSQQPPSQTPHTQPSYQQQ
QQPQSQPPQLQSSQPAYSQQQSQPQHQQSPSPYPQQPSTAQQHQPSQPPYTQQQSQSPYQ
QQQTPQTASSALSQQSSSYPQSQPQQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMASS
KGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFS
PHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSILHPSMN
QSTIAQDRGYMQRNPQIPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGTYGPQGAQ
YGPQGGYPRQPNYNAMPNANYPSPGMGGTMNPMGAGSQMHGQTGVPPYTGLPPGRMSHAT
MGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQG
GMMGTGPPYGQGINSMAGMINPQGAPYPMGANMANNSAGMAASPEMMGLGDVKLTPAAKM
NNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMGMTNL
PAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLY
AFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLK
PPTPASTPHSQMPPLSGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMG
RMSYEPNKDPYSSMRKAPGSDPFLSSGQGPNSAMGDPYNRAAGPGMGNMAMGQRQHYPYG
GPYERVRTEAGMGPEGSLGTGTPQPNILPSTPDSGMYSPSRYPQQQQQQQQQPQRHDSYG
NQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYNVPYSAGQGQA
QQQLPAAQTQQPSQQQTAQPSPQQDMYNQYGSTYPATDRRPAGGPQNQFPFQFSRERVSA
PPGSNAQQNMPPQMMGGPIQSTPEGPQQGTMWQGRNEIGYSYPNRQSTGSTPQGPAYHGV
NRTDEILHSDQRVNHEGPWPSHGNRQPPYGPTAPVPPMTRPPQSNYQTPPSMQNHIPQVS
SPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAAVQPPMIRRDITFPPGSV
EATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNL
SQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSSPSLDEGEYEEE
PQSPNCEEEEEDEEEEEEAAFASKDKAPLESSEEKLVSKFDKLPVKIVQKNDPFVVDYSD
KLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELPWIHRRASCSAAARKRLAAESNPG
AREGETPPSDGPPEKRITATMDDMLSARPGSLPEEEEEVKNLEAAKESSKFPFGISPAQS
HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLL
LILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANIS
GQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPSAVLSPQRLVLETLSKLSIQ
DNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQ
KGSIGNLLGFLEDSLAATQFQQSQASLMHMQNPPFESTSVDMMRRAARALLALAKVDENH
SEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgagacctcagccatatggaggaagtaacccatacgcacag
cagcagggacctcagtcagggccgcagcaaggacatggatatccaggacagccatatggg
ccacagactccccagagatatccaatggcgatgcaaggcaggacgcaaagtgcaatgggc
agcatctcgtatgcacagcagattcctccttacggacagcagggccccagcgcgtatggg
cagcagagccagactccatattacaaccagcaaggtcctcattcccaacagcagcagcct
ccatattctcagcagcccccatcccagacccctcacacccagccttcttatcagcagcaa
cagcagcctcagtctcagcctccacagcttcagtcatcccagcctgcatactcccagcag
cagtcccagccacagcatcaacagtccccatctccgtatcctcagcagccatccacagcc
cagcagcatcaaccgagtcagcccccctacacccagcagcagtcacagtcaccctaccag
cagcagcagactccacagacagcatcctcagctctctctcagcagtcctcttcataccct
cagtcacaaccgcagcagcagcagtctgcatactcccagcaacgattcccacctcctcag
gagttatctcaagactcatttgggtcacaggcatcatctgccccttcaatggcttccagt
aaaggacaagaagatatgaacttgaatcttcagtccagaccctccagtctgccggacctg
tctgggtcaatagatgatctccccatgggtaccgaaggagccctgagtcctggagtaagc
acgtcagggatttccagcagccaaggagagcagagtaacccagctcagtctcctttctct
ccgcatacctctcctcacctaccaggaatcagaggaccttccccttcccctgttggatct
cctgccagtgttgctcagtcccgttctggcccgctctcacctgctgctgtaccaggcaat
cagatgccaccccgaccacccagcgggcaatcggacagtatcctgcatccttccatgaac
cagtcgaccatagcccaagaccgaggttacatgcagaggaatcctcagataccccagtat
agctcccctcagcccggctctgccttatctccacgtcagtcttctggtggacagatgcat
gccgggatgggaccttatcagcagaactccatgggaacctatggaccgcagggggctcag
tatgggcctcaaggaggctatcccaggcagccaaactacaatgccatgcccaatgccaac
taccccagtcccggaatgggaggaaccatgaacccgatgggagcagggagccagatgcat
ggccagactggtgtgccaccttatactgggcttcccccgggaaggatgagccatgcaacc
atggggaacaggccctatggacccaacatggcaaatatgcctcctcaggtgggaacaggg
atgtgtcccccgccaggtggcatgaaccggaaagcacaagaagcagctgctgctgccatg
catgctgctgccaactccattcagaacaggccacctggctatcccaacatgaaccaaggt
ggaatgatggggactgggcctccttatggacaaggaatcaacagtatggctggcatgata
aacccccagggtgctccatatcccatgggagcgaatatggctaacaactccgcagggatg
gcagcaagtcctgagatgatgggccttggggatgtcaaactaacacctgcagctaaaatg
aacaacaaggcagatgggacgccaaaaacagaatccaagtcaaagaagtccagttcgtct
actaccaccaatgagaagattaccaaattgtacgagctgggtggtgaaccagaaaggaag
ctttgggtagaccgttacctagccttcactgaagagaaagcgatgggcatgaccaatctc
ccagctgtgggcaggaaacccctagacctttaccggctctacatctccgtaaaggagatt
gggggactgactcaggtcaacaaaaacaagaaatggcgggagttagccaccaatctcaac
gtgggcacgtctagcagcgcagccagttctttgaagaagcagtatatccagtgtctctat
gcctttgagtgcaagatcgagcgaggcgaagaccctcctccagatatctttgcggctgct
gattcaaagaagtcccagactaagatacaacctccatctccagcgggttcaggctccatg
cagggtccccagacacctcagtccaccagcagctctatggcagaaggaggagacttgaaa
cccccgactccagcatcaacgccacacagtcagatgccccctttgtcaggcatcaggagc
aactcagttggccttcaggatgcctttgcagatggcagtgatcccacgttccagaagcgg
aactccatgactccaaatccagggtaccagcccagcatgaatacctctgacatgatgggt
cgcatgtcctacgagccaaataaggatccttatagcagtatgaggaaagctcctggaagt
gatcccttcctgtcctcagggcagggccccaacagtgctatgggtgacccttataatcgt
gctgcaggtcccggaatgggtaacatggccatggggcaacggcaacactatccctatgga
gggccttacgagcgagtgaggacggaggctggaatgggacccgagggcagcttgggcacc
ggcactccgcagcccaacatcttgccttccacccctgactcggggatgtactctcccagc
cgctatccacagcagcagcagcagcagcagcaacagccgcagagacatgattcctatggc
aatcagttttccactcaaggcacatcttctggcagccccttccctagccagcaaaccacc
atgtatcagcagcaacagcagaactataagcggccgatggatggcacttacggtccccct
gccaagcggcacgaaggggagatgtacaacgtaccgtacagcgccggacaggggcaggcg
cagcagcagctgcctgcagcacagacccagcagccgagccagcagcaaactgcacagcct
tctccgcaacaggacatgtacaaccagtatgggagcacgtaccctgctactgaccgccgg
cccgctggaggcccccagaaccagttcccattccagttcagcagagagagggtctcggcc
cccccaggctcaaatgctcagcagaacatgccgcctcagatgatgggtggtcccatccag
tctactccagaggggccgcagcagggcaccatgtggcaagggcgcaatgaaatagggtac
agctatccaaatcggcagagcactggctcgacgccccaggggcctgcttatcacggagta
aaccgaacagatgaaatcctacattcagatcagagggtcaatcatgagggcccgtggcct
tcccatggcaaccgtcaacctccttatggccccactgcccccgtgcccccaatgacgaga
cccccgcagtctaactaccagacccctcctagcatgcagaatcacattcctcaggtatcc
agcccagcacctctgcccagacctctggagaaccgcacctcacccagtaaatctccgttc
ctgcactcggggatgaaaatgcagaaggcaggacctcctgtccctgcctctcacatagca
ccagcagctgtgcagcctcccatgatacggagggacatcaccttcccacccggatcagtg
gaagctacacaacctgtgctgaagcaaaggagacggttgacagcaaaagatattgggact
cctgaagcctggcgggtgatgatgtctctgaagtctgggctgctggctgaaagcacatgg
gccttagataccataaacatcctgctctatgatgacaacagcataatgaccttcaacctc
agccagctgccggggttgctagaactcctggtggaatacttccggcgttgcctgattgaa
atttttgggatcctgaaggagtatgaggtgggagatccaggacaaagaacactattggat
cccgaaaggttctgcaagtcttcaagtccctctcttgacgagggggagtacgaagaggag
ccgcagagcccaaactgtgaggaggaagaggaggatgaggaggaggaagaggaggctgcc
tttgcgagcaaggacaaagcacccctggagagcagcgaggagaagctggtcagcaagttc
gacaagcttccggtcaagattgtgcagaaaaatgacccctttgtggtagattattccgac
aagctggggcgagtgcaggagtttgagagcgggttgctgcactggcggatcggcggggga
gacaccacggagcacatccagacccacttcgagagcaaaatggagctaccttggattcac
agacgagcttcctgcagcgctgccgcaagaaaacgtttagcagccgagagcaatccgggc
gctagggagggagagacccctccatctgatggccccccggagaagaggataacggccacc
atggatgacatgctttcggcccggccagggtccctgccggaggaagaggaagaggtcaaa
aacttggaagcagcaaaggaaagcagcaagttcccattcggtatcagtccagctcagagc
cacagaaacataaaaattctggaggacgaacctcacagtaaggatgagacgcccctgtgc
accctcctggactggcaggactctcttgccaaacgctgcatctgtgtctcgaatatcatc
aggagtttatcgtttgtgccgggcaatgactttgagatgtctaaacaccccggtctgctg
ctgattttagggaaactgattctgctgcatcacaagcatccagagcgcaaacaggcaccg
ctgacgtatgagaaagaagaggagcaggaccaaggggtgagctgcaacaaggtggagtgg
tggtgggactgcttggagatgctacgtgaaaacacgttggttaccctagccaacatttct
ggtcagttggacctctccccttacccagaaagcatctgtttgcctatcctggatggactc
ctccactgggcagtttgtccgtcagcagaggcccaggaccccttcccgaccttggggccc
agtgctgtcctctcccctcagagactggttttggaaacactcagcaaactcagcatccag
gacaacaacgtggatttgattcttgcgactccccccttcagtcgcttggagaagctctac
agcaccatggtgcgtttcctcagtgacagaaagaacccggtgtgtcgagagatggccgtg
gtactactggccaacttggcacagggggacagcctggcagctcgagcgattgctgtgcag
aagggcagcattggcaacctgttgggcttcttggaggacagcctggcagccactcagttc
cagcagagtcaggccagcttgatgcacatgcaaaacccaccctttgagtcgacgagcgtg
gacatgatgcgtcgggcagcccgagcgctgcttgccctggccaaagtggacgagaaccac
tctgagttcacgttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaac
tccttggtttcacaagttatttgtgacgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
