Alligator sinensis (Chinese alligator): 102374093
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Entry
102374093 CDS
T02922
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03008
Ribosome biogenesis in eukaryotes
asn03013
Nucleocytoplasmic transport
asn03015
mRNA surveillance pathway
asn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102374093 (NXF1)
03015 mRNA surveillance pathway
102374093 (NXF1)
03008 Ribosome biogenesis in eukaryotes
102374093 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102374093 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102374093 (NXF1)
03009 Ribosome biogenesis [BR:
asn03009
]
102374093 (NXF1)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102374093 (NXF1)
mRNA cycle factors
Stress granule specific factors
102374093 (NXF1)
Ribosome biogenesis [BR:
asn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102374093 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
102374093
NCBI-ProteinID:
XP_025070745
UniProt:
A0A3Q0HJP1
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MSDVHDGPRCRYNPYGSRPNRRGDDWHDRGRGGASNIHVAARRDQPIPDRGGNAGRDGTR
KNWFKITIPYGRKYDRSWLLTAIQNVCTVPFNPVEFHYDHNRAQFYVEDATAASALKLVS
RKITDRENYKVVIIINSSAPPQSVQNELKPEEIEHLKLCMSKRYDRLQQALDLKDLRTDS
DLVAQNVDMVLKRCSCMQAVLRIIEENIIPELLSLNLSGNKLYRLDDLAELAQKATNIKI
LNLSRNELKSERELDKVKGLKLEELWLDGNPLCDCFRDQSTYISAVRERFPKLLRLDGHE
LPPPIAFDVEAPTTLPPCKGSYFGSDNVKVLALRFLQLYYSIYDSGDRQGLLDAYHDGAC
CSLSIPFFPQNPSRSTLSEYFKDSRNVKKLKDPTMRFKLLKHTRLNVVAFLNELPKTQHD
INSFVVDVCAQTNTLLCFAVHGIFKEVDGKSRDSVRAFTRVFVVVPAGNSGLCIVNDQLF
VRNATTEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLQAFSMQSGMNLEWSQKCLQDNDWD
YSRAAQVFTQLKVTQGPPVGVGWGGRRVRGTPRGGWEGTPRVTSALSQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgtccacgacgggccccgctgcagatacaacccttacgggtcgcggccgaac
cggcgaggcgatgattggcacgataggggccggggcggcgccagcaacatccatgtcgcg
gcgaggcgcgaccagcccatcccggatcggggcggcaatgccgggcgtgatggcacccgg
aagaactggttcaagatcacgatcccgtacgggaggaagtacgaccggtcgtggctgctg
accgctatccagaacgtgtgcaccgtccctttcaaccccgtggagttccattacgaccac
aaccgggctcagttctacgtagaagacgccactgcggccagcgctctcaaactggtgtcc
cgcaagatcacggacagagagaactacaaggtggtgataatcatcaactcgtcggccccg
ccccagtctgtccagaacgagttgaagccagaggagattgaacatctgaagctttgcatg
agcaagaggtatgaccgtctccagcaggccctggacctcaaggacctccgcacagactct
gacctggtggcgcagaacgtcgacatggtgctgaaacggtgcagctgcatgcaggctgtg
ctgcgcatcattgaggagaacatcatccctgagctcctgtccctgaacctgagtggcaac
aagctgtaccggctggacgacctggccgagctggcgcagaaagccaccaacatcaagatc
ctcaatctctcccgcaacgagctgaagtcggagcgggagctggataaggtgaaggggctc
aagctggaggagctgtggctggacgggaacccgctgtgcgactgcttccgggaccagtcc
acttacatcagcgctgtccgggagcggttccccaagctgctgcgcctggacgggcacgag
ctgccccctcccatcgccttcgatgtggaagcccccactaccctccccccctgcaaggga
agctactttggctctgacaacgtgaaggtgctggcccttcgcttcctgcagctgtactac
tccatttacgactctggcgacaggcaagggctgctggacgcctaccacgacggcgcctgc
tgctccctcagcatccccttcttcccgcagaacccctccaggagcaccctgagtgagtac
ttcaaggacagccgcaatgtgaagaagctcaaggatcccaccatgcgcttcaagctgctc
aagcacacgcgcctcaacgtggtggctttcctcaacgagctgcccaagacccagcatgac
atcaactcctttgtggtggacgtctgcgcccagacgaacacgctgctgtgctttgctgtg
cacgggatcttcaaggaggttgacggcaagtcccgggactcggtacgagccttcacccgc
gtgttcgttgttgtaccagccggcaactcggggctgtgcatcgtgaatgaccagttgttc
gtgcgcaacgccacgacggaggagatccggaaggctttcgtcatgccggcgcctacgccc
tcgtccagccccgtgcccacgctctcagccgagcagcaggagatgctgcaggccttctcc
atgcagtctggcatgaatcttgagtggtcacagaagtgcctccaggacaacgactgggac
tacagcagggcagcacaggtcttcacccagctcaaggtgacccagggacccccagtgggc
gtgggctggggggggaggagggtgaggggaaccccaaggggtggctgggaggggaccccc
agggtcacctctgctctcagccagtag
DBGET
integrated database retrieval system
