Alligator sinensis (Chinese alligator): 102374177
Help
Entry
102374177 CDS
T02922
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102374177 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102374177 (PATL1)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102374177 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
102374177 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
102374177
NCBI-ProteinID:
XP_025071925
UniProt:
A0A3Q0HMX3
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MGTRLAESKGKGDVSLEDCPLDEDEDAFHALGEEDEDIDQFNDDTFGAGAVDDDWQEAHE
RLAELEDKPATTGEQEDGTVTDEMDLLGDHEENLAERLTKMVIDNELEDPAIMQAVQTRL
PVQHPGGLNSSIWDGSAVLRHIRGPLLTQEMPSVSVLDYALPQRPPQARDEERDLSERAL
PRRSSSPVIGSPPVRAVPIGTPPKQAAMPNFNQQILCPKPVHIRAPMQQRYPAPYGERMS
PNQLCSVPNSSLLGHPFPPNVTPVLTHLQRAQLLGGAQAGRMSPSQFARISGLVGSPLPS
MNPKLLQGRVGQMVSPASGFRAFFGVPPPPAPPSAQQQQHPPCPGSHLQNLRSQPQMFRP
DTTHLHPQHRRLLHQRQQQNRNQHRNLNGSAGDRGSHRNSHQEQMQKDPYANLMLQREKD
WVSKIQMMQLQSTDPYLDDYYYQNYFQKLEKISATEEMHGDGPKKERTKLITPQVAKLEH
AYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYS
LLLDVEDYERRYLLSLEGERPALMEERKQKICDMYDNLRGKMPSQDRPSDDHFVQIMCIR
KGKRLVARILPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGT
VTSLLQQLANLPHSATALAPANLHLSAVLQSKFGLSLLYLVLSRGEELQSSDAATELMQD
NQWTELMLMATRELLRIPQAALAKPVSTPSNLLALFSRYVDQQKLNLLETKLQLVQGIR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgccttgctgagagcaagggaaagggtgatgtgtccctggaggactgccct
ctggatgaggacgaagatgcctttcatgccctgggcgaggaggatgaagatattgaccag
ttcaacgatgacacatttggagccggtgctgtggatgatgattggcaggaggcacatgag
cggttggctgaactggaagacaagcctgcaaccactggggagcaggaagatggaacagtc
actgatgaaatggacctgctgggggaccatgaagagaacctggcagagaggctgaccaag
atggtaatcgataacgaactggaagacccagccatcatgcaggctgtgcaaacccggctc
cctgtgcaacatccaggaggactgaactccagcatctgggatggatcagcagttctgaga
cacatccgagggccgcttctcactcaggagatgccttccgtgtcagtgcttgactacgcc
ctgcctcagaggccaccccaggcccgggatgaggagcgcgacctctcggagagggcactg
cccaggcgctcttcctcccctgtcattggaagcccccctgtccgtgctgtccccatcggc
accccgcccaagcaggctgccatgccgaacttcaaccagcagatcctatgtccaaagcct
gttcacattcgggctccaatgcagcagcgttaccctgccccttacggcgagaggatgtct
ccgaaccagctgtgcagtgtcccgaattcctccctcctgggccacccgttccctcccaac
gtcactcctgttctcacccacctgcagagagcacagctgctaggaggtgcacaggccggc
cgtatgtctcccagccaatttgctcgaatctctggacttgttggtagtcccctcccatcc
atgaaccccaagttgctgcagggccgagtggggcagatggtgtcaccagccagtgggttc
cgtgccttctttggggtgccgccccctccagcacctccctcagcgcagcagcagcagcat
cccccatgtcctgggtcccatttgcagaacttaaggtcccagccacagatgtttcgacca
gacacgactcatcttcacccacagcatcggcgacttctgcatcagagacaacagcagaac
cggaatcagcaccggaatctgaacggctcagcgggggaccgagggagccatcgaaacagc
catcaggagcagatgcagaaggacccctatgccaatcttatgctgcagcgggagaaagac
tgggtgtctaagatccagatgatgcagctgcaaagcactgacccatacttagatgattat
tactatcagaattacttccagaagctggagaaaatatcagcaactgaggaaatgcatgga
gatggccccaagaaggagcgtactaaactcatcacgccccaggtagccaagctggagcat
gcctacaagccagtgcagtttgagggctcattagggaagctcacggtctccagtgtgaat
aacccccggaaaatgattgacgcagtggtgacatcccgcagtgaggatgatgagaccaag
gagaagcaggttcgagataagagacgtcagacacttgtcacaattgaaaagacatatagc
ctcctcctagatgtggaggactatgagagacgctatcttctgagcctggaaggggaaagg
ccagccctgatggaggagaggaagcagaagatctgtgacatgtatgacaatctgaggggg
aaaatgcccagccaagataggcctagtgatgaccactttgtacaaatcatgtgtatccgg
aaagggaaacggttggttgcccggatcctccccttcctgtccacggagcaggccgctgat
atactcatggcaacagccaggaacctgcctttccttatcaagaaggatgctcaggatgag
gtgctgccctgcctgttgagacccttctctcatgttctatatcatcttccgctgggaact
gtcaccagccttctgcagcagctagcaaacctacctcacagtgcaacagcgctggcacct
gccaacctgcacctctcagctgtgctccagagcaagttcggcttgtccctgctatacttg
gttttaagccgtggggaagaattgcagagttcagatgctgccacagaacttatgcaagac
aaccagtggacagagctgatgctcatggcaaccagagagcttctgcggatccctcaggca
gccctcgcaaaaccagtgtctaccccctctaacctgttagcccttttctctcgctacgtt
gatcagcagaagctgaacttgctggagacaaagttgcagttggtgcagggaatacggtag
DBGET
integrated database retrieval system
