Alligator sinensis (Chinese alligator): 102374216
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Entry
102374216 CDS
T02922
Symbol
NCBP1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
asn03015
mRNA surveillance pathway
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102374216 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
102374216 (NCBP1)
03015 mRNA surveillance pathway
102374216 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102374216 (NCBP1)
03041 Spliceosome [BR:
asn03041
]
102374216 (NCBP1)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
102374216 (NCBP1)
Spliceosome [BR:
asn03041
]
Common components
Common spliceosomal components
Cap binding complex
102374216 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
102374216
NCBI-ProteinID:
XP_025054874
UniProt:
A0A3Q0G5D2
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MPKAAGRHRRDKCGGRGGGPARAAEATAEPLPPLPQPFAPEGACGRPEVGRGNRARQKRP
LPLRPPLRAASRPPARARVPGAAALPARGAERLPARPGHLPATSWQTHKRRRTSEPSEIE
ERLESLICRVGEKSTSSLESNLEGLAGVLEADLPNYKSKILRILCTVARLLPEKLTVYTT
LVGLLNARNYNFGGEFVEAMIRQLKECLKVNMYNEAVYLVRFLSDLVNCHVIAAPSMVAM
FENFVSVTQEEDVPQVRSDWYVYAFLSXXXXXXXXXXLYEKKDAEMDRLLSQTESYLKRR
QKIHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDHWQERHILRPYLAFDSILCEALQH
NLPPFTPPPHTEDSVYPVPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHW
KERKTCAAQLLSYPGNNKIPLNYHIVEVIFSELFQLPTPPHIEVMYTTLLIELCKLQPGS
LPQVLAQATEMLYMRLDTMNTICVDRFINWFSHHLSNFQFRWSWEDWSDCLTQDPEKSKA
KFVKEVLEKCMRLSYHQRIIDIVPASFSVLSPANPVCIYKYGDESNRSLPGYTVALCLTI
AIKNKASNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSAL
AKFHEVFKTLAESDEGKLHVLRVMYEVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSS
ELTHDFTRFYIWEILHSTIRKMNKHVLKIQKELEETKARLARQHKRRDSDDDDYDDDRSS
DREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMLLTEHLVRCETGGIDVVTPWYK
SCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAVFQQFCALQA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggccgcggggaggcaccgccgtgacaagtgcggaggccggggggggggcccc
gccagggcggcggaagctactgcggagcctcttcctcctcttccccagccctttgccccg
gaaggcgcttgtggccggccggaagtggggagggggaacagagcgcgccagaagcgcccg
ttgccgctgcggcctccgctccgcgcagcttctcgcccacccgcccgcgcacgcgtcccc
ggtgccgccgcgcttcctgcccggggggcggagcgcctcccggcgcggcctgggcatctg
cctgcgaccagctggcaaactcataaaaggaggagaacatccgagccatctgaaattgaa
gagagactagaatctttaatatgcagagtgggtgagaagagtacttcatctttggagagc
aatttggaaggtctagctggtgtcctggaggctgacttaccaaactacaagagcaagata
ttaagaattctttgtacagttgcacgtctattaccagaaaaacttactgtctacacaaca
ctagttgggttgctgaatgccaggaactacaattttggtggggaatttgtagaagccatg
attcgtcaactcaaagaatgtttgaaagtcaatatgtataatgaagctgtgtatttagtt
cgttttctttctgatcttgtgaattgtcatgtaatagctgcaccttcaatggtagccatg
tttgagaactttgtgagtgtgactcaagaggaggatgtaccccaggtgcggagtgattgg
tatgtgtatgcatttctgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtatgag
aagaaggatgcagagatggaccgcctcttatcacaaacagaaagctatttgaaacggcgt
cagaaaattcatgtacccatgttgcaagtttggactgctgataaaccgcatccacaagaa
gagtacttagactgtctttgggctcaaattcagaagttgaaaaaagatcactggcaagaa
agacacattctgaggccctacctggccttcgacagcatcctctgtgaagcattacagcac
aacctgcctccttttactcctccacctcacactgaagactcagtttacccagtgccaaga
gttatctttagaatgtttgactatacagatgatcctgagggccctgttatgcctggcagt
cattctgttgaaagatttgtaatagaagagaatcttcattgcatcatcaaatcccactgg
aaagagaggaagacttgtgctgcacagttactgagctatccaggaaataacaagatccct
ttgaactaccacatagttgaggtaatattttcagagttgtttcagcttccaactccacca
cacattgaagttatgtacacaacacttcttattgaactatgcaaacttcagcctggctct
ttaccacaagttcttgcgcaagccacagaaatgctgtatatgcgtttggatactatgaat
actatatgtgtagacaggttcattaattggttttctcatcatctgagtaactttcagttc
cgttggagctgggaggactggtcagactgtcttacccaagaccctgaaaagtctaaagcc
aaatttgtaaaagaagtcttggaaaaatgcatgagactttcctaccatcaacggataata
gacattgttcctgcaagtttttctgtcttgagtcctgcaaatccagtgtgtatatacaag
tatggagatgaaagcaacaggtcccttccaggatatactgttgcactctgtttgactatt
gctattaaaaataaagccagtaatgatgaaatcttcagcatcttaaaagatgtgcccaat
cctaaccaggatgatgatgatgatgaagggttcagcttcaaccctctgaaaatagaagtt
tttgtacaaactctgctccatctagctgctaagtccttcagccactccttcagtgccctc
gcaaagtttcatgaagtcttcaaaacgcttgctgaaagtgatgaggggaagctccatgtc
ctaagggttatgtacgaggtgtggaagaaccatccacagatgattgctgtgcttgttgac
aagatgatccgaacacagattgtcgactgtgctgcagtagcaaactggatcttctcttca
gagcttactcatgattttactaggttctatatctgggaaatcttacactctacaattcgt
aagatgaacaagcatgttctcaagatccaaaaggaactagaggagaccaaagcaagatta
gccagacagcacaaacgacgagacagcgatgatgatgactatgatgatgaccgaagcagt
gacagggaggatggaccattggaagagcaaatagaacgcttgcaggaaaaagtggagtct
gctcagagtgagcaaaagaatctcttccttgttatattccagcgtttcattatgttgtta
actgagcatttggtgcgatgcgaaactggtgggattgatgtagttacgccctggtacaag
agctgtatagagaggctgcagcagatcttcttgcagcatcaccagattattcagcagtac
atggtgaccctggagaaccttctgtttacagctgaactggaccatcacatattggctgta
tttcagcaattctgtgctttgcaagcttga
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