Alligator sinensis (Chinese alligator): 102374430
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Entry
102374430 CDS
T02922
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03030
DNA replication
asn03420
Nucleotide excision repair
asn03430
Mismatch repair
asn03440
Homologous recombination
asn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102374430 (RPA1)
03420 Nucleotide excision repair
102374430 (RPA1)
03430 Mismatch repair
102374430 (RPA1)
03440 Homologous recombination
102374430 (RPA1)
03460 Fanconi anemia pathway
102374430 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102374430 (RPA1)
03032 DNA replication proteins [BR:
asn03032
]
102374430 (RPA1)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102374430 (RPA1)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102374430 (RPA1)
DNA replication proteins [BR:
asn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102374430 (RPA1)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102374430 (RPA1)
MMR (mismatch excision repair)
102374430 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102374430 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
102374430
NCBI-ProteinID:
XP_006032939
UniProt:
A0A1U7SJE8
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MQGEPVSKPVLQVINTRAIATGSGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAH
CVCQVNRFIVNSLKDGRRVVILMELDVLQTADVVRGNIGDPVPYNEGQGQQQQQRSSASA
ANTAPSKPQQQNGSSAAGAPTVKYYGPSKESGKSAGTSLFNTPGGSQSKVVPIASLNPYQ
SKWTICARVTQKSQIRTWSNSRGEGKLFSIELVDQSGEIRATAFNDQVDKFFSIIELNKV
YFFTKGTLKTANKQFSAVKNDYEITFNSETSVLPCEDSQHLPSVQFDFVPISELENTSKD
SIVDVIGICKSYDDITKITVKSTNREVSKRNVHLIDASGKMVTTTLWGDEAERFDGSRQP
VIAIRGARVSDFGGRSLSVLSSSTLVMNPDSPEAFKLRGWFDSEGQALECTSISDLRGGS
TGGGSAIWKTLHESKSENLGQGDKADYFSCVATVVQLRKENCMYQACPAQDCNKKVIDQQ
NGLYRCEKCNREFPNFKYRMILFVIIADCLETQWVTCFQESAEVILGQNTAFLGELKEKN
EQAFDEVIQNALFNTFEFKIRVKLETFNDESRIKATAVDVKPVSYKEHCKRLIASIRKNA
QQG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgagcccgtgtccaagcccgtgctgcaagtcatcaacacgcgtgctattgcc
acgggcagcggccctccgcgctaccgcgtgctgatgagcgacggggtgaacacgctctcc
tctttcatgttggcaacacagctgaactctctagttgaagaggagcgcttgtctgcccac
tgtgtctgccaggtgaacagattcattgttaacagcctgaaagacggaaggagagtggtt
atattgatggagttagatgttctgcaaactgctgatgtggttcgtggaaatattggtgat
ccagtgccatacaatgaaggtcaggggcagcagcagcagcagcgttcctcagcttcagca
gccaacacagcacccagcaaaccacagcagcagaatgggagctcagcagcaggagctcct
actgttaagtactatggaccttcaaaggagtctggtaaatcagctggtaccagcttattt
aatacgcctggtggatcacagtccaaggtggtaccaattgccagtctgaacccataccaa
tccaagtggaccatatgtgctcgagtcacccaaaaaagccagatccgcacctggagcaat
tcccgtggtgaaggaaagctgttctccatagagctagttgatcaaagtggtgagattcga
gctactgcattcaatgatcaagtggacaagttcttttccatcattgaattgaacaaggtg
tatttcttcaccaaaggaactttgaagactgctaacaagcagttttcagctgtgaagaat
gactatgagattacattcaatagtgagacttcagttttgccctgtgaggattcccaacat
cttccctctgttcagttcgattttgtaccaatctctgagttagagaacacgagcaaagac
tcaattgtagatgtaattggaatctgtaagagctatgatgatatcactaaaattacagtg
aaatctaccaatagggaggtgtctaagaggaacgtgcatttgatagatgcatctggaaag
atggtgacgacaactctatggggagatgaggctgaacgatttgatggttctagacaacct
gtcatagcgatcagaggagccagagtctctgattttggtggccggagtctctctgtcctg
agctcaagcacgcttgtgatgaacccggatagtccagaggcgttcaaactccgaggatgg
tttgactccgaagggcaggctttggaatgtacttcaatctctgatctgagaggtggatca
acaggtggagggagtgccatttggaaaactctgcatgaatctaaatctgagaacttaggg
caaggagataaggcggattattttagctgtgtggccacagtggtacaactgcgcaaagag
aactgcatgtaccaggcttgcccagctcaagattgcaataagaaagtgatagaccaacag
aatggactgtaccgctgtgaaaaatgtaatcgcgagttccccaacttcaagtatcgcatg
atcctctttgtgatcattgcagactgtctggagactcagtgggtgacttgtttccaggag
tcagcagaagtcattcttgggcaaaacactgctttccttggagagctaaaagaaaagaat
gagcaggcatttgatgaagtgatccaaaatgccctcttcaacacatttgagttcaagatt
cgagtgaagctggagactttcaatgacgagtcccggattaaggctaccgcggtagatgtg
aagcctgtgagctacaaagaacactgcaagaggttgattgcgagcatcagaaaaaacgcg
cagcaaggatga
DBGET
integrated database retrieval system
