Alligator sinensis (Chinese alligator): 102374438
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Entry
102374438 CDS
T02922
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03420
Nucleotide excision repair
asn04115
p53 signaling pathway
asn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102374438 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
102374438 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102374438 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asn04121
]
102374438 (DDB2)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102374438 (DDB2)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102374438 (DDB2)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102374438 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_TEP1_2nd
Beta-prop_Vps41
NBCH_WD40
DUF6080
Motif
Other DBs
NCBI-GeneID:
102374438
NCBI-ProteinID:
XP_006034724
UniProt:
A0A1U7S4R0
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MNPCSHRMAPANQPKEKKHMKAHEHQPEEEAKSAEKRKRESGELENEPQAKRLFVRKAMK
PPEKTDWAKGGSTIRNMGVLFHQLKQQYSIIHYIYQNMLGGSIRPQLRQCLQLPFLRSLT
SYRPFRTASPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLNKTCFIKGMGAGGAI
TGMKFNPFNPSQLYTSSIAGTTTLQDFNGSTLRVFTSTEDWDFWYCSVDVSASCRTVVTG
DNVGNVVLLSTGGEEIWKLKLHKKKVTHVEFNSRCDWLLATASVDQTVKIWDLRNIKDKT
SFLHVLPHDKPVNAAYFSPTDGAKLLSTDQHSEIRVYSSSDWSKPQHLIPHPHRQFQHLT
PIKATWHPRYDLIVAGRYPDPKFPSYTVDELRTVDIFDGNTGEMVCQLHDLNASGIISLN
KFNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTQQGIGGRSSSRRGGQRQPNQGK
SKLRAKLLAQELEETKIKGKNTKSQGRKQKKDLED
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttgctcacacagaatggcccctgccaaccagccgaaggaaaagaagcacatg
aaggctcatgagcatcagccagaggaagaggcaaagtcagctgagaaaaggaaacgagaa
tctggagaactagagaatgagccacaagcaaagagactgtttgtgagaaaagctatgaaa
cccccagagaaaacagactgggctaaaggcggctccacgatcagaaacatgggggtgctc
ttccatcagctgaagcagcagtacagcatcatccattacatctaccagaacatgctgggt
ggctctatccggccacaactcagacagtgtctccagctgcccttcctgcgttctctcacc
tcataccgccccttccgaacagcaagcccctttgacaggagagtgacatgtctggaatgg
catccaacgcaccccagtactgtggctgtgggctccaaaggtggagatatcattctttgg
gactacgaagtacttaacaaaacctgcttcataaaggggatgggagctggaggggccatc
acaggaatgaagtttaacccttttaaccctagtcagctgtacacatcgtcaattgccggc
actaccaccctgcaggattttaatggcagtacgctccgggtcttcaccagcaccgaggac
tgggatttctggtattgcagtgttgatgtgtctgcaagctgccggactgtggtgacaggt
gataacgtgggtaatgtggtcctgctcagcactggtggggaagagatttggaagctgaaa
ttacacaagaagaaagtaactcatgtggagtttaactctcgctgcgattggctcttagcc
acagcctctgtggaccagacagtcaaaatctgggacctcaggaacatcaaagacaagaca
agtttccttcacgtgcttcctcatgacaaacctgtcaatgctgcttacttcagcccaaca
gatggtgcaaagctcttgagcacagaccaacacagtgaaatcagagtttactcctcttca
gattggagcaaaccacagcacctgatcccacatccacatcggcagttccagcacctcaca
ccaatcaaggcaacatggcatcctcgttatgacctcattgtggcaggtcgttacccagac
cccaagttccccagctacactgtggatgaactacgaactgttgatatatttgatggaaac
actggggagatggtgtgccagctccatgacctcaatgcatctggcattatttcacttaat
aagtttaaccctatgggagacacactggcctctggcatgggttttaatattttgatctgg
agtcgggaggagatggtggccaagaagcaggaacacctcttgaaagccatgacacagcag
gggattggaggcaggagctcctccagacgtggggggcagagacaaccaaatcaaggaaaa
agcaaactcagagccaagctgcttgctcaggaactggaagagactaaaataaagggcaaa
aataccaaatcacagggcagaaagcagaagaaggatctagaggactga
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integrated database retrieval system
