Alligator sinensis (Chinese alligator): 102375203
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Entry
102375203 CDS
T02922
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03082
ATP-dependent chromatin remodeling
asn03083
Polycomb repressive complex
asn04110
Cell cycle
asn04330
Notch signaling pathway
asn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102375203 (HDAC1)
03083 Polycomb repressive complex
102375203 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102375203 (HDAC1)
04350 TGF-beta signaling pathway
102375203 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102375203 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102375203 (HDAC1)
Enzymes [BR:
asn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102375203 (HDAC1)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
102375203 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
102375203 (HDAC1)
BRAF-HDAC complex
102375203 (HDAC1)
REST complex
102375203 (HDAC1)
SHIP complex
102375203 (HDAC1)
MiDAC complex
102375203 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
102375203 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102375203 (HDAC1)
Chromatin remodeling factors
NuRD complex
102375203 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
102375203
NCBI-ProteinID:
XP_025054488
UniProt:
A0A1U7RJV3
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLYYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMETFQPSAVALQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEDEEDPDKRISIRNSDKRIACDEEF
SDSEDEGEGGRKNVANYKKAKRAKTEEDKEEEEKKDEKEEEKTKEEKAEPKGVKEETKSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcaggggaccaagcggaaagtctgttattactatgatggggacgttgga
aactactattatggccagggccatccaatgaaaccccacaggatccgaatgacccataac
ctcctgctgtactatggcctttacagaaaaatggagatctatcgtccccacaaagcgaat
gctgaagaaatgaccaagtaccatagtgatgactacattaaatttctgagatctatacgc
ccagataatatgtctgagtacagcaagcagatgcaaagattcaacgttggggaagattgc
cccgtgtttgatggattgtttgagttttgtcagctgtctgcaggaggatctgtcgccagt
gctgtgaagctgaacaaacaacaaacagatattgctgtgaattgggcaggaggccttcac
catgctaagaaatcagaggcttctggtttctgttatgtcaacgatatagtcttagccatc
ttggaactgctaaagtaccaccagagagtgctgtatattgacattgatattcaccatgga
gatggtgtggaggaggccttttataccacagaccgtgtcatgacagtatccttccataaa
tatggagaatacttcccaggaacaggggacctgcgggatattggtgcaggcaaaggcaaa
tattatgctgtcaactatcccctccgggacgggattgacgatgagtcctatgaggcaata
tttaagccggtgatatctaaagtgatggagacgttccagcccagcgcagttgccctgcag
tgtggatcagattctctgtcaggggacaggttgggctgttttaatctgaccatcaaaggt
catgccaagtgtgtggagttcgtaaagagttttaatttgcccatgctgatgttaggagga
ggtggctacacaatccgcaatgtggctagatgctggacctacgagacggctgtagctttg
gacactgaaattccaaatgagcttccgtataatgactatttcgaatactttggaccagac
tttaaactccacatcagtccttcaaatatgaccaatcagaacaccaatgagtatcttgag
aagattaagcagcgtctctttgagaacttacgcatgcttcctcatgcccctggcgtccag
atgcagccaattcctgaggatgctgttcaggaagatagtggagatgaagatgaagaagat
cctgacaaacgcatttcaatccgcaattctgataagagaatagcctgtgatgaagaattc
tcagattctgaagatgaaggagaaggtggtcgcaaaaatgttgccaactataagaaagcc
aagcgtgcaaaaacagaagaggataaagaggaggaggagaaaaaagatgagaaagaagag
gagaaaacaaaagaggagaaagcagaacctaaaggggtaaaggaagagactaaatcagcc
taa
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