Alligator sinensis (Chinese alligator): 102375357
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Entry
102375357 CDS
T02922
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn04382
Cornified envelope formation
asn04510
Focal adhesion
asn04512
ECM-receptor interaction
asn04518
Integrin signaling
asn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102375357 (COL4A4)
04518 Integrin signaling
102375357 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102375357 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102375357 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102375357 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asn04147
]
102375357 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
asn00536
]
102375357 (COL4A4)
Exosome [BR:
asn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102375357 (COL4A4)
Glycosaminoglycan binding proteins [BR:
asn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102375357 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102375357
NCBI-ProteinID:
XP_025056224
UniProt:
A0A3Q0G9A8
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MALTKYSFKWIKQIIAPWWLILIFSVKHIYGGTYAYIGPCEGRDCSVCQCFPEKGSRGQP
GELGSQGPIGPLGLTGPVGLPGEKGQRGENGLLGPAGEKGDKGPTGVPGFPGLDGLPGLL
GVGGHRGKPGLDGSNGSRGDPGFPGGKGYIGPRGPPGYFGQKGEKGMSVYVSHFRRGDPG
DRGDPGAAGVPGSRGARGAVGPHGYHGQPGLQGAPGHPGLPGEQGNPGIGVDGQKGELGD
VGSPGPPGQPLLVGPPGAMLMKGEKGQKGMTGVIGPNGLRGPKGAPGIGEKGEKGIPGVP
GIRGFPGSPGSQGSVGRKGRTGFPGAPGQAGYSGMKGDRGEQGLPGLPVSYGTPLLPVKG
PRGDPGFPGPDGEVGSDGPAGPSGPPGRPGEDGASLPGLPGVTGAQGHPGFQGDPGLPGR
AESNPGRPGAPGTPGLPGAPGRRGVSGTPGRVCTSNGPPGELGAKGQMGFPGRNGEKGEK
GSEGRCSCGPGPAGPPGVPGAPGGRGQKGEMGYPGRGGQKGDSGLPGTRGSTGLLGLHGT
PGMRGEKGEKGDPARIRIKGKKGEKGFPGIPGFPGQNGSAGRDGERGMPGEKGLPGDYRP
PLPGDKGFPGTPGHPGVRGPPGLPGLGIPGPKGNKGFFGDPGSPGVSGPPGLKGSKGDAH
CSVPPVPGNPGLPGFKGIQGPKGERGPPGLPGPDGFDGQKGQQGKTGIGIPGPGGFRGNA
GEPGGEGEKGFTSDGSTGSPGTPGRDGQKGAPGDTIYGPPGIPGSRGSAGSPGMQGMRGD
PGSRGPQGQPGTPGFPGAKGRRGKKGDMGALGRRGLPGEQCDTNLPGPLGLPGPKGWPGP
PGFPGSKGYQGDMGSPGSVGKKGIPGPNGIPGHSGPPGSQGSSGLPGDNGLPGLPGLKGR
KGIQGLRGFPGSPGKQGEMGIPGEKGEQGETGPPGLPGDPGDGGQKGEKGPQGDPGYIII
HHEKGQKGDPGPPGEQGFPGERGDKGSPGIRGLPGLPGTDGLPGLPGESGICGQIGLPGP
RGSPGPPGTRGIPGFSEAPGDQGEQGLPGTPGSPGPDGRKGCKGNRGDPSSQPGLPGPKG
PVGEPGLPGPHGFPGEPGFPGAQGQTGRQGPKGIPGYLGVPGFPGAVGVPGLPGVPGDQG
LIGLPGPAGLPGFSGSKGRKGMSGLPGLDGLNGLQGQKGSPGVPGHSNTGHPGYQGEAGL
KGDKGESGQPGISLPGPPGETGLLGLPGRAGGPGPKGHVGRAPEIAPRGLPGDRGPPGSG
SNRGPPGSAGPPGEIIFVKGDPGNFGIPGARGFPGQPGQQGAKGFPGKQGREGLHGLRGN
PGPQGPPGQVGQPGDQGIEGHPGPPGPKGFRGDPGEPGKVEDNLCPKFPGLPGRIGSKGH
EGPKGLQGPRGYTGFPGRKGEEGSPGLTGQDGTPGLPGPPGDQGDVGEQGYPGPQGSHGQ
TGIPGPPGPEVRAASGFLLVLHSQSDREPFCPQGMPKVWTGYSLLYLEGQEKAHNQDLGL
AGSCLPLFSTMPFTYCNINQVCYYASRNDKSYWLSSAAPLPMMPLSEDEIKPYISRCAVC
EAPAQAIALHSQDQFIPPCPQNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQQGTCQFFANEYSFWLTTVRPELQFTSAPLSQTLKEGQEQRKKISRCQVCLKY
G
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacaaagtattcttttaagtggattaaacagattatagctccctggtggctg
atacttattttctcagtgaaacacatttatgggggcacatatgcatacattggtccatgt
gaaggccgtgattgttcagtttgccagtgctttcctgaaaaaggatcaagaggtcaacct
ggtgaattagggtctcagggtccaattgggcctttggggcttacaggaccagttggtttg
ccaggagaaaagggacagagaggtgagaatgggctgcttgggccagctggagaaaaaggt
gataagggccccacaggagtcccaggctttcctggtttagatggcctgcctgggttactt
ggagttggaggacataggggcaaacctggcttggatggttccaatggttcaagaggagat
ccaggatttccaggggggaaaggatatatcggacctagaggcccacctggctattttgga
caaaaaggagaaaaaggaatgtctgtgtatgtttcacatttcaggaggggtgatccagga
gacagaggtgatccaggagccgctggtgtacctggatctaggggtgcaaggggagcagtg
ggcccacatggatatcacggccagccaggcttgcagggcgctccaggccaccctggtttg
ccaggtgaacagggaaatccaggcattggagttgatggacagaaaggggaattgggtgat
gttggatctcctgggcctccaggacagccactgttagttggccctccaggtgccatgctg
atgaaaggagaaaagggtcaaaaaggaatgactggagtgataggacctaacggattgcgg
ggaccaaaaggtgcacctggaattggggaaaaaggagagaaaggaattcctggagtccct
ggaataaggggttttcctggttctcctggatctcaaggttccgtaggaagaaagggaaga
acaggatttcctggtgctcctggccaggctggctattcaggcatgaagggagatcgtgga
gaacaagggctaccaggcctgcctgtttcttatggaacaccacttttgcctgtgaaaggt
cctcgaggagacccgggatttccaggtcctgatggagaagttgggtcagatggaccagct
ggtccttccggcccaccaggaagaccaggtgaagatggagcaagccttcctggcctacca
ggagtgactggtgcacaaggccatccaggttttcaaggtgaccctggtctccctggaaga
gctgaatcaaatccaggaagaccaggggctccaggcacaccagggttaccaggagcacca
ggaagacgtggtgtgtctggaacacctggtagagtttgtactagcaatgggccccctgga
gaattgggagcaaaaggccaaatgggatttccaggtcgaaacggtgaaaaaggagaaaaa
gggagtgaaggtcgctgctcatgtggtcctggcccagctggaccacctggagtaccagga
gcacctggtggtcggggacagaaaggagagatgggatatcctggaaggggtggacagaag
ggtgattcaggcttgcctggtacacggggatcaacaggactcctgggactccatggtacc
cctggaatgcgtggggagaaaggagaaaagggtgacccagctagaatcagaatcaaagga
aaaaaaggagaaaagggctttcctgggattccaggatttccaggccaaaatggtagtgct
ggaagagatggagagcggggaatgcctggagaaaaaggacttccgggtgattacagacca
ccactgccaggtgataaaggatttcctggaaccccaggacatcctggtgtgagaggaccc
ccaggactaccaggcttgggaattcctggcccaaagggaaacaaaggcttctttggggac
ccaggcagccctggtgtaagtgggccacctggtctaaagggttcaaaaggtgatgcacac
tgctctgttccaccagttcctggaaatccaggactcccaggttttaaaggtattcaagga
ccaaagggagaaagaggaccgcctggtctccctgggccagatggctttgatggacaaaaa
ggacaacaaggcaaaacaggcataggaattcctggaccaggaggtttccggggcaatgct
ggggagccggggggtgaaggtgaaaaaggctttacttcagatggaagcacaggctcacct
ggcactcctggaagagatggtcagaaaggggctccaggtgataccatttatggtccccca
ggaattccaggcagtagagggtcagctggatcacctggcatgcaaggcatgagaggtgat
ccaggcagccgtggaccacaaggacagcctggtacaccaggatttccaggtgctaaaggt
cgcagaggcaaaaaaggagatatgggagctctaggacggcgaggcctacccggtgagcaa
tgtgacacaaacttaccagggccactgggactgccaggtccaaagggatggccaggccct
ccaggctttccaggctctaaaggctaccagggggacatgggttccccaggatcagttgga
aaaaagggtattccaggacctaacggcatacctgggcactctggtcctccagggtcacaa
ggatcatcagggctccctggggataatggactgcctggtctcccaggactgaaaggaaga
aaagggattcaagggctccgaggtttcccaggatccccaggaaaacaaggggagatggga
atcccaggtgaaaaaggtgaacaaggagaaacgggtccacctgggctccctggagaccct
ggggatggaggtcaaaaaggtgaaaaagggccacaaggagatcctggttacatcatcata
caccatgagaaaggacaaaagggtgatccaggtcctcctggtgagcagggatttccagga
gaaagaggggacaaaggcagccctggaatcagagggctcccaggattgccaggcactgat
ggactccccggactcccaggtgaatctggcatttgtggacagataggtttaccaggccca
cgaggctccccagggccaccaggcaccagaggaattcctggtttctcagaagccccgggt
gatcagggtgagcagggtttaccaggaactcctggaagtccaggaccagatggcagaaaa
ggatgcaaagggaacagaggtgacccatccagtcaacctggtctaccgggtccaaaaggg
cctgtaggagagcctggcttaccaggtccccatggattcccaggtgagccaggttttcct
ggtgcccaagggcaaactggaagacaaggacctaaagggattcctggatacctaggagta
ccaggctttccaggtgctgtgggtgttccaggattgccaggtgttccaggtgaccaaggc
ctcattggactcccaggacctgcaggattgccaggattctctggttccaaaggcaggaaa
ggtatgtctggattgcctggattagatggcttgaacggactgcaagggcaaaagggttca
ccaggagttccaggtcacagcaatacagggcatccaggataccaaggagaagctggacta
aaaggagacaaaggtgaatctggacagccaggaatttctcttccaggtcctcctggagaa
acaggcctgctaggactgccaggtagagcaggaggtcctgggcctaaaggacatgttgga
agggctccagaaattgctccacgcggtcttccaggggatcgagggccacctggctcaggc
agtaacagaggtccgcctggcagtgctggccctcctggagagatcatctttgtgaaagga
gatccaggcaactttggtattccaggagcaagagggtttcctggccaaccaggccaacaa
ggagccaaaggctttccaggaaaacaaggaagagaaggcctacatggtctcagaggcaac
cctggtccccagggtcctcctgggcaagttgggcagccaggagaccagggcattgaaggt
catcctgggcctccaggtcccaaaggcttcagaggtgaccctggtgaaccaggaaaagtt
gaagacaacttatgccctaaatttccagggcttcctggcagaattgggtcaaaaggacat
gaagggcctaaaggattacaagggccaagaggctacactggattcccagggagaaaaggg
gaagaagggtcacctggcttgacaggtcaagatggtaccccaggtctgcctggtcctcca
ggtgaccaaggtgatgtaggagaacaaggataccctggaccacaaggttcacatggccaa
actgggatcccaggaccaccagggcctgaagttagagctgcaagtggattcctgcttgtc
cttcacagtcagtcagacagagagccattttgcccccagggaatgccaaaagtatggact
ggctatagtctgctatatctggaaggacaggaaaaagctcataatcaagatcttggtctg
gcaggatcttgccttcctttatttagtaccatgccctttacctactgcaacatcaaccaa
gtttgttactacgctagtcgaaatgataaatcttattggctgtcaagtgctgctcctcta
ccaatgatgccactctctgaagatgaaataaaaccatatattagcagatgtgctgtatgt
gaggccccagctcaagctatagcacttcatagccaagatcagttcattcctccctgccca
cagaactggagaagtctttggataggatattcctttctaatgcacactggatctggagac
cagggaggtggacagtctcttatgtcacctgggagttgccttgaagacttcagatcagca
ccattcattgaatgccagggtcagcagggaacatgtcagttttttgctaatgagtacagt
ttctggttaacaactgtgaggccagaattgcaattcacatctgctcctctgtcacaaact
ctcaaagaagggcaggaacagcggaaaaaaattagtagatgtcaggtatgcttgaagtat
ggctaa
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